RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 MMRN1Q13201 1228 aa7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 IFFO2Q5TF58 517 aa7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 GNEQ9Y223 722 aaKnown RBP7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 SIAH2O43255 324 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 SSFA2P28290 1259 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 GRM5P41594 1212 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 USP4Q13107 963 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 CCDC102BQ68D86 513 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 SIRT1Q96EB6 747 aa7.72□□□□□ -1.17
HMGB1P5-201ENST00000255320 SFI1A8K8P3 1242 aa7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 CD2BP2O95400 341 aaKnown RBP7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 TMCO4Q5TGY1 634 aa7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 TXNDC2Q86VQ3 553 aa7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 MPNDQ8N594 471 aa7.71□□□□□ -1.18
HMGB1P5-201ENST00000255320 SEC13P55735 322 aa7.7□□□□□ -1.18
HMGB1P5-201ENST00000255320 PSME1Q06323 249 aa7.7□□□□□ -1.18
HMGB1P5-201ENST00000255320 ARID5BQ14865 1188 aa7.7□□□□□ -1.18
HMGB1P5-201ENST00000255320 WNT7AO00755 349 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 ADH1CP00326 375 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 MYCP01106 439 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 ATP2B4P23634 1241 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 OCLNQ16625 522 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 TMPRSS4Q9NRS4 437 aa7.69□□□□□ -1.18
HMGB1P5-201ENST00000255320 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
HMGB1P5-201ENST00000255320 ZNF784Q8NCA9 323 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P5-201ENST00000255320 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
HMGB1P5-201ENST00000255320 CYLDQ9NQC7 956 aa7.68□□□□□ -1.18
HMGB1P5-201ENST00000255320 PRMT3O60678 531 aa7.67□□□□□ -1.18
HMGB1P5-201ENST00000255320 NR3C2P08235 984 aa7.67□□□□□ -1.18
HMGB1P5-201ENST00000255320 SLC19A1P41440 591 aa7.67□□□□□ -1.18
HMGB1P5-201ENST00000255320 MFAP1P55081 439 aaKnown RBP7.67□□□□□ -1.18
HMGB1P5-201ENST00000255320 SND1Q7KZF4 910 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMGB1P5-201ENST00000255320 TMEM229AB2RXF0 380 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 M0R2N6 131 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 LILRA1O75019 489 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 STAU1O95793 577 aaKnown RBP7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 SCNN1AP37088 669 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 SCNN1DP51172 638 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 DHX9Q08211 1270 aaKnown RBP7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 CCDC116Q8IYX3 515 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 C1orf216Q8TAB5 229 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 ZNF358Q9NW07 568 aa7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 CXXC1Q9P0U4 656 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P5-201ENST00000255320 NR5A1Q13285 461 aa7.65□□□□□ -1.18
HMGB1P5-201ENST00000255320 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P5-201ENST00000255320 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB1P5-201ENST00000255320 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
HMGB1P5-201ENST00000255320 A0A0G2JS52 829 aa7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 LGR5O75473 907 aa7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 RGS22Q8NE09 1264 aa7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 CCER1Q8TC90 406 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
HMGB1P5-201ENST00000255320 ARID4AP29374 1257 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 WEE1P30291 646 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 SERPINB4P48594 390 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 GDF10P55107 478 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 TAS1R3Q7RTX0 852 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 ETNK1Q9HBU6 452 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
HMGB1P5-201ENST00000255320 ADD1P35611 737 aaKnown RBP7.62□□□□□ -1.19
HMGB1P5-201ENST00000255320 EPHA4P54764 986 aa7.62□□□□□ -1.19
HMGB1P5-201ENST00000255320 MYT1Q01538 1121 aa7.62□□□□□ -1.19
HMGB1P5-201ENST00000255320 ZNF598Q86UK7 904 aaKnown RBP7.62□□□□□ -1.19
HMGB1P5-201ENST00000255320 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
HMGB1P5-201ENST00000255320 INHAP05111 366 aa7.61□□□□□ -1.19
HMGB1P5-201ENST00000255320 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
HMGB1P5-201ENST00000255320 HINFPQ9BQA5 517 aa7.61□□□□□ -1.19
HMGB1P5-201ENST00000255320 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
HMGB1P5-201ENST00000255320 SOWAHDA6NJG2 315 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 ALDH1A1P00352 501 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 NNTQ13423 1086 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 FKBP5Q13451 457 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 MTMR7Q9Y216 660 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 EMILIN1Q9Y6C2 1016 aa7.6□□□□□ -1.19
HMGB1P5-201ENST00000255320 GNRH1P01148 92 aa7.59□□□□□ -1.19
HMGB1P5-201ENST00000255320 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
HMGB1P5-201ENST00000255320 ESF1Q9H501 851 aaKnown RBP7.59□□□□□ -1.19
HMGB1P5-201ENST00000255320 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
HMGB1P5-201ENST00000255320 C21orf2O43822 256 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 IGFBP4P22692 258 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 FOXC1Q12948 553 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 CAPN12Q6ZSI9 719 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 SLC4A9Q96Q91 983 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 KLF16Q9BXK1 252 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 PRKD2Q9BZL6 878 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 RAB6BQ9NRW1 208 aa7.58□□□□□ -1.2
HMGB1P5-201ENST00000255320 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms