RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
UBE4B-201ENST00000253251 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
UBE4B-201ENST00000253251 MCTP1Q6DN14 999 aa18.06■□□□□ 0.48
UBE4B-201ENST00000253251 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
UBE4B-201ENST00000253251 ARAP3Q8WWN8 1544 aa18.06■□□□□ 0.48
UBE4B-201ENST00000253251 NAP1L5Q96NT1 182 aaPredicted RBP18.06■□□□□ 0.48
UBE4B-201ENST00000253251 PDCP20941 246 aa18.05■□□□□ 0.48
UBE4B-201ENST00000253251 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
UBE4B-201ENST00000253251 SLC3A2P08195 630 aaKnown RBP18.04■□□□□ 0.48
UBE4B-201ENST00000253251 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
UBE4B-201ENST00000253251 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
UBE4B-201ENST00000253251 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
UBE4B-201ENST00000253251 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 EXOC5O00471 708 aa18.04■□□□□ 0.48
UBE4B-201ENST00000253251 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
UBE4B-201ENST00000253251 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
UBE4B-201ENST00000253251 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
UBE4B-201ENST00000253251 INSRP06213 1382 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 PIK3R4Q99570 1358 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
UBE4B-201ENST00000253251 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
UBE4B-201ENST00000253251 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
UBE4B-201ENST00000253251 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.48
UBE4B-201ENST00000253251 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.48
UBE4B-201ENST00000253251 XBP1P17861 261 aa18.02■□□□□ 0.47
UBE4B-201ENST00000253251 AACSQ86V21 672 aa18.02■□□□□ 0.47
UBE4B-201ENST00000253251 MBIPQ9NS73 344 aa18.02■□□□□ 0.47
UBE4B-201ENST00000253251 FLIIQ13045 1269 aa18.01■□□□□ 0.47
UBE4B-201ENST00000253251 HSP90AB2PQ58FF8 381 aa18.01■□□□□ 0.47
UBE4B-201ENST00000253251 AKAP2Q9Y2D5 859 aa18.01■□□□□ 0.47
UBE4B-201ENST00000253251 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
UBE4B-201ENST00000253251 NACAP1Q9BZK3 213 aa18.01■□□□□ 0.47
UBE4B-201ENST00000253251 CCDC47Q96A33 483 aaKnown RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 FAM177BA6PVY3 158 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 KCNA6P17658 529 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 FBXW7Q969H0 707 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 VPS37CA5D8V6 355 aaPredicted RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 GLRX3O76003 335 aaKnown RBP18■□□□□ 0.47
UBE4B-201ENST00000253251 TRIM27P14373 513 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 NEK4P51957 841 aa18■□□□□ 0.47
UBE4B-201ENST00000253251 GOLGA6L19H0YKK7 550 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 TOM1O60784 492 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
UBE4B-201ENST00000253251 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 CTNNA3Q9UI47 895 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 BRMS1Q9HCU9 246 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
UBE4B-201ENST00000253251 GSE1Q14687 1217 aa17.99■□□□□ 0.47
UBE4B-201ENST00000253251 KRT32Q14532 448 aa17.98■□□□□ 0.47
UBE4B-201ENST00000253251 SIL1Q9H173 461 aa17.98■□□□□ 0.47
UBE4B-201ENST00000253251 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
UBE4B-201ENST00000253251 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
UBE4B-201ENST00000253251 BECN2A8MW95 431 aa17.98■□□□□ 0.47
UBE4B-201ENST00000253251 SNRPA1P09661 255 aaKnown RBP17.98■□□□□ 0.47
UBE4B-201ENST00000253251 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
UBE4B-201ENST00000253251 ADCY10Q96PN6 1610 aa17.97■□□□□ 0.47
UBE4B-201ENST00000253251 CLSTN1O94985 981 aa17.97■□□□□ 0.47
UBE4B-201ENST00000253251 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
UBE4B-201ENST00000253251 YEATS2Q9ULM3 1422 aa17.96■□□□□ 0.47
UBE4B-201ENST00000253251 IL27Q8NEV9 243 aa17.96■□□□□ 0.47
UBE4B-201ENST00000253251 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
UBE4B-201ENST00000253251 MYOM2P54296 1465 aa17.96■□□□□ 0.47
UBE4B-201ENST00000253251 MX1P20591 662 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 VPS53Q5VIR6 699 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 CCDC73Q6ZRK6 1079 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 HECW2Q9P2P5 1572 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 MYD88Q99836 296 aa17.95■□□□□ 0.46
UBE4B-201ENST00000253251 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
UBE4B-201ENST00000253251 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
UBE4B-201ENST00000253251 MBD3O95983 291 aa17.94■□□□□ 0.46
UBE4B-201ENST00000253251 TPM2P07951 284 aa17.94■□□□□ 0.46
UBE4B-201ENST00000253251 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
UBE4B-201ENST00000253251 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
UBE4B-201ENST00000253251 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
UBE4B-201ENST00000253251 IP6K1Q92551 441 aa17.94■□□□□ 0.46
UBE4B-201ENST00000253251 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 PTPRTO14522 1441 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
UBE4B-201ENST00000253251 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
UBE4B-201ENST00000253251 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
UBE4B-201ENST00000253251 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms