RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PHLPP1O60346 1717 aa30.09■■■□□ 2.41
SYNGR3-201ENST00000248121 KDM2BQ8NHM5 1336 aa30.08■■■□□ 2.41
SYNGR3-201ENST00000248121 MCM10Q7L590 875 aa30.08■■■□□ 2.41
SYNGR3-201ENST00000248121 ABCC6O95255 1503 aa30.07■■■□□ 2.4
SYNGR3-201ENST00000248121 LAS1LQ9Y4W2 734 aaKnown RBP30.07■■■□□ 2.4
SYNGR3-201ENST00000248121 COL16A1Q07092 1604 aaPredicted RBP30.06■■■□□ 2.4
SYNGR3-201ENST00000248121 ZNF853P0CG23 659 aa30.05■■■□□ 2.4
SYNGR3-201ENST00000248121 RLBP1P12271 317 aa30.05■■■□□ 2.4
SYNGR3-201ENST00000248121 COG6Q9Y2V7 657 aa30.05■■■□□ 2.4
SYNGR3-201ENST00000248121 PIP4K2BP78356 416 aa30.05■■■□□ 2.4
SYNGR3-201ENST00000248121 LMOD3Q0VAK6 560 aa30.03■■■□□ 2.4
SYNGR3-201ENST00000248121 SSH1Q8WYL5 1049 aa30.03■■■□□ 2.4
SYNGR3-201ENST00000248121 HAP1P54257 671 aaPredicted RBP30.03■■■□□ 2.4
SYNGR3-201ENST00000248121 CALD1Q05682 793 aaKnown RBP30.03■■■□□ 2.4
SYNGR3-201ENST00000248121 IFT57Q9NWB7 429 aa30.03■■■□□ 2.4
SYNGR3-201ENST00000248121 PRDM11Q9NQV5 511 aa30.02■■■□□ 2.4
SYNGR3-201ENST00000248121 COL22A1Q8NFW1 1626 aaPredicted RBP30.02■■■□□ 2.4
SYNGR3-201ENST00000248121 LRRC37A3O60309 1634 aa30.01■■■□□ 2.39
SYNGR3-201ENST00000248121 SMC4Q9NTJ3 1288 aa30■■■□□ 2.39
SYNGR3-201ENST00000248121 GNAI1P63096 354 aa30■■■□□ 2.39
SYNGR3-201ENST00000248121 GAS2L2Q8NHY3 880 aa30■■■□□ 2.39
SYNGR3-201ENST00000248121 MBIPQ9NS73 344 aa29.99■■■□□ 2.39
SYNGR3-201ENST00000248121 VIRMAQ69YN4 1812 aaKnown RBP29.99■■■□□ 2.39
SYNGR3-201ENST00000248121 CRB1P82279 1406 aa29.98■■■□□ 2.39
SYNGR3-201ENST00000248121 NLRP2Q9NX02 1062 aa29.98■■■□□ 2.39
SYNGR3-201ENST00000248121 CFAP44Q96MT7 982 aa29.97■■■□□ 2.39
SYNGR3-201ENST00000248121 ZKSCAN2Q63HK3 967 aa29.97■■■□□ 2.39
SYNGR3-201ENST00000248121 CENPQQ7L2Z9 268 aaPredicted RBP29.97■■■□□ 2.39
SYNGR3-201ENST00000248121 CLUAP1Q96AJ1 413 aa29.97■■■□□ 2.39
SYNGR3-201ENST00000248121 COL5A2P05997 1499 aaPredicted RBP29.96■■■□□ 2.39
SYNGR3-201ENST00000248121 TOM1O60784 492 aa29.96■■■□□ 2.39
SYNGR3-201ENST00000248121 CSB-PGBD3P0DP91 1061 aa29.96■■■□□ 2.39
SYNGR3-201ENST00000248121 SKAP1Q86WV1 359 aa29.96■■■□□ 2.39
SYNGR3-201ENST00000248121 MAP3K5Q99683 1374 aa29.95■■■□□ 2.39
SYNGR3-201ENST00000248121 MEGF6O75095 1541 aa29.95■■■□□ 2.39
SYNGR3-201ENST00000248121 UBAP1LF5GYI3 381 aa29.94■■■□□ 2.38
SYNGR3-201ENST00000248121 TSPYL6Q8N831 410 aa29.94■■■□□ 2.38
SYNGR3-201ENST00000248121 VAMP4O75379 141 aa29.93■■■□□ 2.38
SYNGR3-201ENST00000248121 ALDH1L2Q3SY69 923 aa29.92■■■□□ 2.38
SYNGR3-201ENST00000248121 GNAT3A8MTJ3 354 aa29.92■■■□□ 2.38
SYNGR3-201ENST00000248121 TRIM27P14373 513 aa29.92■■■□□ 2.38
SYNGR3-201ENST00000248121 RTF1Q92541 710 aaKnown RBP29.91■■■□□ 2.38
SYNGR3-201ENST00000248121 NOB1Q9ULX3 412 aaKnown RBP29.91■■■□□ 2.38
SYNGR3-201ENST00000248121 TCERG1O14776 1098 aaKnown RBP29.91■■■□□ 2.38
SYNGR3-201ENST00000248121 IL17REQ8NFR9 667 aa29.91■■■□□ 2.38
SYNGR3-201ENST00000248121 DZIP1LQ8IYY4 767 aaKnown RBP29.9■■■□□ 2.38
SYNGR3-201ENST00000248121 ZNF428Q96B54 188 aa29.9■■■□□ 2.38
SYNGR3-201ENST00000248121 MIS18AQ9NYP9 233 aa29.9■■■□□ 2.38
SYNGR3-201ENST00000248121 IGHDP01880 384 aa29.89■■■□□ 2.37
SYNGR3-201ENST00000248121 ATF7IPQ6VMQ6 1270 aa29.89■■■□□ 2.37
SYNGR3-201ENST00000248121 MVPQ14764 893 aaKnown RBP29.88■■■□□ 2.37
SYNGR3-201ENST00000248121 WDR17Q8IZU2 1322 aa29.88■■■□□ 2.37
SYNGR3-201ENST00000248121 KRT24Q2M2I5 525 aa29.87■■■□□ 2.37
SYNGR3-201ENST00000248121 ZNF530Q6P9A1 599 aaPredicted RBP29.87■■■□□ 2.37
SYNGR3-201ENST00000248121 C8orf58Q8NAV2 365 aa29.87■■■□□ 2.37
SYNGR3-201ENST00000248121 BRPF1P55201 1214 aaPredicted RBP29.87■■■□□ 2.37
SYNGR3-201ENST00000248121 ELL2O00472 640 aaPredicted RBP29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 CHL1O00533 1208 aa29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 KIF16BQ96L93 1317 aa29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 COL14A1Q05707 1796 aaKnown RBP29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 AAMPQ13685 434 aa29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 FTSJ3Q8IY81 847 aaKnown RBP29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 STRN4Q9NRL3 753 aa29.86■■■□□ 2.37
SYNGR3-201ENST00000248121 PKD1L3Q7Z443 1732 aa29.85■■■□□ 2.37
SYNGR3-201ENST00000248121 PLEKHO1Q53GL0 409 aaPredicted RBP29.85■■■□□ 2.37
SYNGR3-201ENST00000248121 LGR6Q9HBX8 967 aa29.85■■■□□ 2.37
SYNGR3-201ENST00000248121 HTATSF1O43719 755 aaKnown RBP29.84■■■□□ 2.37
SYNGR3-201ENST00000248121 MS4A1P11836 297 aa29.84■■■□□ 2.37
SYNGR3-201ENST00000248121 TWISTNBQ3B726 338 aaPredicted RBP29.84■■■□□ 2.37
SYNGR3-201ENST00000248121 LARP1Q6PKG0 1096 aaKnown RBP29.84■■■□□ 2.37
SYNGR3-201ENST00000248121 PCDHB15Q9Y5E8 787 aa29.83■■■□□ 2.37
SYNGR3-201ENST00000248121 TOM1L2Q6ZVM7 507 aa29.83■■■□□ 2.37
SYNGR3-201ENST00000248121 MRPL50Q8N5N7 158 aaKnown RBP29.83■■■□□ 2.37
SYNGR3-201ENST00000248121 RAPGEF4Q8WZA2 1011 aa29.83■■■□□ 2.37
SYNGR3-201ENST00000248121 PLCH1Q4KWH8 1693 aa29.82■■■□□ 2.36
SYNGR3-201ENST00000248121 CEMIPQ8WUJ3 1361 aa29.82■■■□□ 2.36
SYNGR3-201ENST00000248121 AMOTQ4VCS5 1084 aa29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 AKAP4Q5JQC9 854 aa29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 MPRIPQ6WCQ1 1025 aa29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 CERKQ8TCT0 537 aa29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 BTG4Q9NY30 223 aa29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 PARP4Q9UKK3 1724 aaKnown RBP29.81■■■□□ 2.36
SYNGR3-201ENST00000248121 ADAMTS7Q9UKP4 1686 aa29.79■■■□□ 2.36
SYNGR3-201ENST00000248121 IPO8O15397 1037 aaKnown RBP29.79■■■□□ 2.36
SYNGR3-201ENST00000248121 TATP17735 454 aaPredicted RBP29.79■■■□□ 2.36
SYNGR3-201ENST00000248121 TSPYL4Q9UJ04 414 aa29.78■■■□□ 2.36
SYNGR3-201ENST00000248121 TMEM57Q8N5G2 664 aa29.78■■■□□ 2.36
SYNGR3-201ENST00000248121 SHANK3Q9BYB0 1731 aa29.78■■■□□ 2.36
SYNGR3-201ENST00000248121 SIPA1L3O60292 1781 aaPredicted RBP29.77■■■□□ 2.36
SYNGR3-201ENST00000248121 ADAMTS2O95450 1211 aa29.77■■■□□ 2.36
SYNGR3-201ENST00000248121 KDM3BQ7LBC6 1761 aa29.77■■■□□ 2.36
SYNGR3-201ENST00000248121 SCN11AQ9UI33 1791 aa29.77■■■□□ 2.36
SYNGR3-201ENST00000248121 OVOS2A0A0G2JMS6 1433 aa29.76■■■□□ 2.35
SYNGR3-201ENST00000248121 C1orf141Q5JVX7 400 aa29.76■■■□□ 2.35
SYNGR3-201ENST00000248121 EVA1CP58658 441 aa29.75■■■□□ 2.35
SYNGR3-201ENST00000248121 NUTM2BA6NNL0 878 aaPredicted RBP29.75■■■□□ 2.35
SYNGR3-201ENST00000248121 NUTM2EB1AL46 878 aaPredicted RBP29.75■■■□□ 2.35
SYNGR3-201ENST00000248121 NUTM2AQ8IVF1 878 aaPredicted RBP29.75■■■□□ 2.35
SYNGR3-201ENST00000248121 ITPRIPQ8IWB1 547 aa29.75■■■□□ 2.35
SYNGR3-201ENST00000248121 NRAPQ86VF7 1730 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms