RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 KCNQ2O43526 872 aa29.03■■■□□ 2.24
HCFC1R1-201ENST00000248089 NSD2O96028 1365 aa29.02■■■□□ 2.24
HCFC1R1-201ENST00000248089 PLSCR1O15162 318 aa29.02■■■□□ 2.24
HCFC1R1-201ENST00000248089 RAPGEF4Q8WZA2 1011 aa29.01■■■□□ 2.23
HCFC1R1-201ENST00000248089 LRP5O75197 1615 aa29.01■■■□□ 2.23
HCFC1R1-201ENST00000248089 ZCRB1Q8TBF4 217 aaKnown RBP29■■■□□ 2.23
HCFC1R1-201ENST00000248089 POLKQ9UBT6 870 aa29■■■□□ 2.23
HCFC1R1-201ENST00000248089 NBPF14Q5TI25 921 aa28.99■■■□□ 2.23
HCFC1R1-201ENST00000248089 KNSTRNQ9Y448 316 aa28.99■■■□□ 2.23
HCFC1R1-201ENST00000248089 WASHC2AQ641Q2 1341 aa28.97■■■□□ 2.23
HCFC1R1-201ENST00000248089 TATP17735 454 aaPredicted RBP28.96■■■□□ 2.23
HCFC1R1-201ENST00000248089 MORC1Q86VD1 984 aa28.94■■■□□ 2.22
HCFC1R1-201ENST00000248089 PKD1L3Q7Z443 1732 aa28.94■■■□□ 2.22
HCFC1R1-201ENST00000248089 TXNRD1Q16881 649 aa28.92■■■□□ 2.22
HCFC1R1-201ENST00000248089 SYTL4Q96C24 671 aaPredicted RBP28.92■■■□□ 2.22
HCFC1R1-201ENST00000248089 NCAPD2Q15021 1401 aa28.91■■■□□ 2.22
HCFC1R1-201ENST00000248089 PROM2Q8N271 834 aa28.9■■■□□ 2.22
HCFC1R1-201ENST00000248089 EYA1Q99502 592 aa28.89■■■□□ 2.22
HCFC1R1-201ENST00000248089 ANO8Q9HCE9 1232 aaPredicted RBP28.89■■■□□ 2.22
HCFC1R1-201ENST00000248089 PCDH11XQ9BZA7 1347 aa28.89■■■□□ 2.21
HCFC1R1-201ENST00000248089 PCDH11YQ9BZA8 1340 aa28.89■■■□□ 2.21
HCFC1R1-201ENST00000248089 EIF4A2Q14240 407 aaKnown RBP28.88■■■□□ 2.21
HCFC1R1-201ENST00000248089 PRIM1P49642 420 aaKnown RBP28.86■■■□□ 2.21
HCFC1R1-201ENST00000248089 AMER1Q5JTC6 1135 aaPredicted RBP28.86■■■□□ 2.21
HCFC1R1-201ENST00000248089 TOGARAM1Q9Y4F4 1720 aa28.84■■■□□ 2.21
HCFC1R1-201ENST00000248089 PAPPAQ13219 1627 aa28.83■■■□□ 2.21
HCFC1R1-201ENST00000248089 LY75O60449 1722 aa28.83■■■□□ 2.21
HCFC1R1-201ENST00000248089 CASZ1Q86V15 1759 aa28.83■■■□□ 2.21
HCFC1R1-201ENST00000248089 ITGB4P16144 1822 aa28.82■■■□□ 2.2
HCFC1R1-201ENST00000248089 CC2D1BQ5T0F9 858 aaKnown RBP28.81■■■□□ 2.2
HCFC1R1-201ENST00000248089 STK32BQ9NY57 414 aa28.81■■■□□ 2.2
HCFC1R1-201ENST00000248089 CYP27B1O15528 508 aa28.79■■■□□ 2.2
HCFC1R1-201ENST00000248089 CNGB1Q14028 1251 aaPredicted RBP28.79■■■□□ 2.2
HCFC1R1-201ENST00000248089 SPG7Q9UQ90 795 aa28.79■■■□□ 2.2
HCFC1R1-201ENST00000248089 PER1O15534 1290 aaPredicted RBP28.78■■■□□ 2.2
HCFC1R1-201ENST00000248089 IGSF1Q8N6C5 1336 aa28.77■■■□□ 2.2
HCFC1R1-201ENST00000248089 SLC15A2Q16348 729 aa28.75■■■□□ 2.19
HCFC1R1-201ENST00000248089 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
HCFC1R1-201ENST00000248089 SLC27A3Q5K4L6 730 aa28.72■■■□□ 2.19
HCFC1R1-201ENST00000248089 PDGFDQ9GZP0 370 aaPredicted RBP28.72■■■□□ 2.19
HCFC1R1-201ENST00000248089 KCNQ4P56696 695 aa28.71■■■□□ 2.19
HCFC1R1-201ENST00000248089 MPRIPQ6WCQ1 1025 aa28.71■■■□□ 2.19
HCFC1R1-201ENST00000248089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.71■■■□□ 2.19
HCFC1R1-201ENST00000248089 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
HCFC1R1-201ENST00000248089 MTHFSP49914 203 aa28.7■■■□□ 2.18
HCFC1R1-201ENST00000248089 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
HCFC1R1-201ENST00000248089 ZNF827Q17R98 1081 aa28.69■■■□□ 2.18
HCFC1R1-201ENST00000248089 C5P01031 1676 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 NPC1L1Q9UHC9 1359 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 AEBP1Q8IUX7 1158 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 IFNL2Q8IZJ0 200 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 QSER1Q2KHR3 1735 aa28.68■■■□□ 2.18
HCFC1R1-201ENST00000248089 ZBTB7AO95365 584 aa28.67■■■□□ 2.18
HCFC1R1-201ENST00000248089 PHKG2P15735 406 aa28.67■■■□□ 2.18
HCFC1R1-201ENST00000248089 CCNL1Q9UK58 526 aaPredicted RBP28.67■■■□□ 2.18
HCFC1R1-201ENST00000248089 IL13P35225 146 aa28.66■■■□□ 2.18
HCFC1R1-201ENST00000248089 NKX1-1Q15270 411 aaPredicted RBP28.66■■■□□ 2.18
HCFC1R1-201ENST00000248089 PALLDQ8WX93 1383 aa28.65■■■□□ 2.18
HCFC1R1-201ENST00000248089 TAF1LQ8IZX4 1826 aa28.65■■■□□ 2.18
HCFC1R1-201ENST00000248089 SULT6B1Q6IMI4 303 aa28.65■■■□□ 2.18
HCFC1R1-201ENST00000248089 PPP1R1BQ9UD71 204 aaPredicted RBP28.65■■■□□ 2.18
HCFC1R1-201ENST00000248089 PLEKHO1Q53GL0 409 aaPredicted RBP28.63■■■□□ 2.17
HCFC1R1-201ENST00000248089 AKT1S1Q96B36 256 aa28.62■■■□□ 2.17
HCFC1R1-201ENST00000248089 ZNF530Q6P9A1 599 aaPredicted RBP28.61■■■□□ 2.17
HCFC1R1-201ENST00000248089 PIGBQ92521 554 aa28.61■■■□□ 2.17
HCFC1R1-201ENST00000248089 TMOD3Q9NYL9 352 aa28.61■■■□□ 2.17
HCFC1R1-201ENST00000248089 ATF5Q9Y2D1 282 aaPredicted RBP28.61■■■□□ 2.17
HCFC1R1-201ENST00000248089 KDRP35968 1356 aa28.61■■■□□ 2.17
HCFC1R1-201ENST00000248089 AMOTQ4VCS5 1084 aa28.59■■■□□ 2.17
HCFC1R1-201ENST00000248089 TFCP2L1Q9NZI6 479 aa28.59■■■□□ 2.17
HCFC1R1-201ENST00000248089 DIAPH1O60610 1272 aaKnown RBP28.58■■■□□ 2.17
HCFC1R1-201ENST00000248089 SMARCC1Q92922 1105 aaPredicted RBP28.58■■■□□ 2.17
HCFC1R1-201ENST00000248089 COL3A1P02461 1466 aaPredicted RBP28.57■■■□□ 2.16
HCFC1R1-201ENST00000248089 HMOX1P09601 288 aa28.56■■■□□ 2.16
HCFC1R1-201ENST00000248089 C1orf141Q5JVX7 400 aa28.56■■■□□ 2.16
HCFC1R1-201ENST00000248089 VIRMAQ69YN4 1812 aaKnown RBP28.56■■■□□ 2.16
HCFC1R1-201ENST00000248089 MTFR1LQ9H019 292 aa28.56■■■□□ 2.16
HCFC1R1-201ENST00000248089 KDM6AO15550 1401 aaPredicted RBP28.55■■■□□ 2.16
HCFC1R1-201ENST00000248089 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
HCFC1R1-201ENST00000248089 C4BP0C0L5 1744 aa28.55■■■□□ 2.16
HCFC1R1-201ENST00000248089 PNPLA7Q6ZV29 1317 aa28.54■■■□□ 2.16
HCFC1R1-201ENST00000248089 SCN11AQ9UI33 1791 aa28.53■■■□□ 2.16
HCFC1R1-201ENST00000248089 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
HCFC1R1-201ENST00000248089 PTGER2P43116 358 aa28.52■■■□□ 2.16
HCFC1R1-201ENST00000248089 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.15
HCFC1R1-201ENST00000248089 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
HCFC1R1-201ENST00000248089 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
HCFC1R1-201ENST00000248089 LOC102724428A0A0B4J2F2 783 aa28.48■■■□□ 2.15
HCFC1R1-201ENST00000248089 MSH5O43196 834 aa28.48■■■□□ 2.15
HCFC1R1-201ENST00000248089 SIK1P57059 783 aa28.48■■■□□ 2.15
HCFC1R1-201ENST00000248089 UBR3Q6ZT12 1888 aa28.47■■■□□ 2.15
HCFC1R1-201ENST00000248089 CABP4P57796 275 aa28.47■■■□□ 2.15
HCFC1R1-201ENST00000248089 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
HCFC1R1-201ENST00000248089 HMGB2P26583 209 aaKnown RBP28.46■■■□□ 2.15
HCFC1R1-201ENST00000248089 CFAP53Q96M91 514 aa28.46■■■□□ 2.15
HCFC1R1-201ENST00000248089 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
HCFC1R1-201ENST00000248089 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
HCFC1R1-201ENST00000248089 AK7Q96M32 723 aa28.45■■■□□ 2.14
HCFC1R1-201ENST00000248089 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms