RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 TSEN34Q9BSV6 310 aaKnown RBP9.48□□□□□ -0.89
TSPAN8-201ENST00000247829 BMP2P12643 396 aa9.47□□□□□ -0.89
TSPAN8-201ENST00000247829 RFX1P22670 979 aa9.47□□□□□ -0.89
TSPAN8-201ENST00000247829 CYLDQ9NQC7 956 aa9.47□□□□□ -0.89
TSPAN8-201ENST00000247829 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
TSPAN8-201ENST00000247829 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
TSPAN8-201ENST00000247829 TSGA10IPQ3SY00 556 aa9.46□□□□□ -0.9
TSPAN8-201ENST00000247829 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
TSPAN8-201ENST00000247829 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
TSPAN8-201ENST00000247829 PHTF2Q8N3S3 785 aa9.45□□□□□ -0.9
TSPAN8-201ENST00000247829 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
TSPAN8-201ENST00000247829 RELBQ01201 579 aa9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 PDE4CQ08493 712 aa9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
TSPAN8-201ENST00000247829 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
TSPAN8-201ENST00000247829 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
TSPAN8-201ENST00000247829 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
TSPAN8-201ENST00000247829 USTQ9Y2C2 406 aa9.43□□□□□ -0.9
TSPAN8-201ENST00000247829 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 ADH1AP07327 375 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 SCTRP47872 440 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
TSPAN8-201ENST00000247829 SPINT1O43278 529 aa9.41□□□□□ -0.9
TSPAN8-201ENST00000247829 RNF135Q8IUD6 432 aa9.41□□□□□ -0.9
TSPAN8-201ENST00000247829 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
TSPAN8-201ENST00000247829 SOS2Q07890 1332 aaPredicted RBP9.4□□□□□ -0.9
TSPAN8-201ENST00000247829 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
TSPAN8-201ENST00000247829 PTGIRP43119 386 aa9.4□□□□□ -0.9
TSPAN8-201ENST00000247829 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
TSPAN8-201ENST00000247829 MAN1A2O60476 641 aa9.39□□□□□ -0.91
TSPAN8-201ENST00000247829 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
TSPAN8-201ENST00000247829 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
TSPAN8-201ENST00000247829 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 TTLL8A6PVC2 850 aa9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 ATP9BO43861 1147 aa9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 CHIC2Q9UKJ5 165 aa9.38□□□□□ -0.91
TSPAN8-201ENST00000247829 PIK3CDO00329 1044 aa9.37□□□□□ -0.91
TSPAN8-201ENST00000247829 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
TSPAN8-201ENST00000247829 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
TSPAN8-201ENST00000247829 DOLKQ9UPQ8 538 aa9.37□□□□□ -0.91
TSPAN8-201ENST00000247829 USP4Q13107 963 aa9.36□□□□□ -0.91
TSPAN8-201ENST00000247829 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 ATG7O95352 703 aa9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 MYCP01106 439 aaPredicted RBP9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
TSPAN8-201ENST00000247829 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
TSPAN8-201ENST00000247829 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
TSPAN8-201ENST00000247829 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
TSPAN8-201ENST00000247829 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
TSPAN8-201ENST00000247829 BRD1O95696 1058 aa9.33□□□□□ -0.92
TSPAN8-201ENST00000247829 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
TSPAN8-201ENST00000247829 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
TSPAN8-201ENST00000247829 MEN1O00255 615 aa9.32□□□□□ -0.92
TSPAN8-201ENST00000247829 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
TSPAN8-201ENST00000247829 SKIP12755 728 aa9.32□□□□□ -0.92
TSPAN8-201ENST00000247829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
TSPAN8-201ENST00000247829 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 USP17L3A6NCW0 530 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 USP17L4A6NCW7 530 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 VEGFBP49765 207 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 KCNA1Q09470 495 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 USP17L1Q7RTZ2 530 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 ARHGEF10LQ9HCE6 1279 aa9.31□□□□□ -0.92
TSPAN8-201ENST00000247829 GNRH1P01148 92 aa9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 RANGAP1P46060 587 aaPredicted RBP9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 RNF144AP50876 292 aaPredicted RBP9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
TSPAN8-201ENST00000247829 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 STAU1O95793 577 aaKnown RBP9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 CLN3Q13286 438 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 TMCO4Q5TGY1 634 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 NLRP3Q96P20 1036 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
TSPAN8-201ENST00000247829 WFS1O76024 890 aa9.28□□□□□ -0.92
TSPAN8-201ENST00000247829 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
TSPAN8-201ENST00000247829 NPM2Q86SE8 214 aaKnown RBP9.28□□□□□ -0.92
TSPAN8-201ENST00000247829 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms