RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
NDUFB3-201ENST00000237889 PRIM1P49642 420 aaKnown RBP14.03□□□□□ -0.16
NDUFB3-201ENST00000237889 AKAP12Q02952 1782 aa14.02□□□□□ -0.16
NDUFB3-201ENST00000237889 SLIT3O75094 1523 aa14.02□□□□□ -0.16
NDUFB3-201ENST00000237889 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
NDUFB3-201ENST00000237889 ABCC6O95255 1503 aa14□□□□□ -0.17
NDUFB3-201ENST00000237889 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
NDUFB3-201ENST00000237889 USP47Q96K76 1375 aa13.99□□□□□ -0.17
NDUFB3-201ENST00000237889 ERBB3P21860 1342 aa13.99□□□□□ -0.17
NDUFB3-201ENST00000237889 HTRA3P83110 453 aa13.99□□□□□ -0.17
NDUFB3-201ENST00000237889 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
NDUFB3-201ENST00000237889 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
NDUFB3-201ENST00000237889 TTC21BQ7Z4L5 1316 aa13.98□□□□□ -0.17
NDUFB3-201ENST00000237889 KDM2BQ8NHM5 1336 aa13.98□□□□□ -0.17
NDUFB3-201ENST00000237889 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
NDUFB3-201ENST00000237889 CENPJQ9HC77 1338 aaPredicted RBP13.97□□□□□ -0.17
NDUFB3-201ENST00000237889 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
NDUFB3-201ENST00000237889 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
NDUFB3-201ENST00000237889 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
NDUFB3-201ENST00000237889 SMC1BQ8NDV3 1235 aa13.96□□□□□ -0.17
NDUFB3-201ENST00000237889 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
NDUFB3-201ENST00000237889 AK7Q96M32 723 aa13.95□□□□□ -0.18
NDUFB3-201ENST00000237889 BCS1LQ9Y276 419 aa13.95□□□□□ -0.18
NDUFB3-201ENST00000237889 TGFB2P61812 414 aa13.94□□□□□ -0.18
NDUFB3-201ENST00000237889 COL24A1Q17RW2 1714 aa13.94□□□□□ -0.18
NDUFB3-201ENST00000237889 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
NDUFB3-201ENST00000237889 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
NDUFB3-201ENST00000237889 COL18A1P39060 1754 aa13.93□□□□□ -0.18
NDUFB3-201ENST00000237889 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
NDUFB3-201ENST00000237889 BTAF1O14981 1849 aa13.92□□□□□ -0.18
NDUFB3-201ENST00000237889 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
NDUFB3-201ENST00000237889 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
NDUFB3-201ENST00000237889 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
NDUFB3-201ENST00000237889 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.18
NDUFB3-201ENST00000237889 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
NDUFB3-201ENST00000237889 C9orf131Q5VYM1 1079 aa13.9□□□□□ -0.18
NDUFB3-201ENST00000237889 FCHSD2O94868 740 aa13.89□□□□□ -0.19
NDUFB3-201ENST00000237889 PHF14O94880 888 aa13.89□□□□□ -0.19
NDUFB3-201ENST00000237889 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
NDUFB3-201ENST00000237889 RRAGCQ9HB90 399 aa13.89□□□□□ -0.19
NDUFB3-201ENST00000237889 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
NDUFB3-201ENST00000237889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
NDUFB3-201ENST00000237889 SSFA2P28290 1259 aa13.88□□□□□ -0.19
NDUFB3-201ENST00000237889 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
NDUFB3-201ENST00000237889 KTN1Q86UP2 1357 aaKnown RBP13.87□□□□□ -0.19
NDUFB3-201ENST00000237889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.19
NDUFB3-201ENST00000237889 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
NDUFB3-201ENST00000237889 PCNTO95613 3336 aa13.87□□□□□ -0.19
NDUFB3-201ENST00000237889 A0A0G2JLW4 131 aa13.86□□□□□ -0.19
NDUFB3-201ENST00000237889 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
NDUFB3-201ENST00000237889 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
NDUFB3-201ENST00000237889 IP6K1Q92551 441 aa13.86□□□□□ -0.19
NDUFB3-201ENST00000237889 LTV1Q96GA3 475 aaPredicted RBP13.86□□□□□ -0.19
NDUFB3-201ENST00000237889 NSD2O96028 1365 aa13.85□□□□□ -0.19
NDUFB3-201ENST00000237889 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
NDUFB3-201ENST00000237889 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
NDUFB3-201ENST00000237889 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 MMP10P09238 476 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 AIDAQ96BJ3 306 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
NDUFB3-201ENST00000237889 PALLDQ8WX93 1383 aa13.83□□□□□ -0.19
NDUFB3-201ENST00000237889 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
NDUFB3-201ENST00000237889 PIK3C2AO00443 1686 aa13.83□□□□□ -0.2
NDUFB3-201ENST00000237889 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
NDUFB3-201ENST00000237889 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
NDUFB3-201ENST00000237889 NFAT5O94916 1531 aa13.83□□□□□ -0.2
NDUFB3-201ENST00000237889 ZBTB22O15209 634 aa13.82□□□□□ -0.2
NDUFB3-201ENST00000237889 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
NDUFB3-201ENST00000237889 PIM2Q9P1W9 311 aa13.82□□□□□ -0.2
NDUFB3-201ENST00000237889 DPEP1P16444 411 aa13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 CTCFP49711 727 aaPredicted RBP13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 TMF1P82094 1093 aa13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 DALRD3Q5D0E6 543 aaKnown RBP13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 CICQ96RK0 1608 aaPredicted RBP13.81□□□□□ -0.2
NDUFB3-201ENST00000237889 MLLT1Q03111 559 aaPredicted RBP13.8□□□□□ -0.2
NDUFB3-201ENST00000237889 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
NDUFB3-201ENST00000237889 NME9Q86XW9 330 aa13.8□□□□□ -0.2
NDUFB3-201ENST00000237889 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
NDUFB3-201ENST00000237889 GNPATO15228 680 aa13.79□□□□□ -0.2
NDUFB3-201ENST00000237889 AMPHP49418 695 aa13.79□□□□□ -0.2
NDUFB3-201ENST00000237889 PARP3Q9Y6F1 533 aa13.79□□□□□ -0.2
NDUFB3-201ENST00000237889 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
NDUFB3-201ENST00000237889 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
NDUFB3-201ENST00000237889 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
NDUFB3-201ENST00000237889 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
NDUFB3-201ENST00000237889 KCPQ6ZWJ8 1503 aa13.78□□□□□ -0.2
NDUFB3-201ENST00000237889 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
NDUFB3-201ENST00000237889 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
NDUFB3-201ENST00000237889 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
NDUFB3-201ENST00000237889 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 FOXN1O15353 648 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 SIK1P57059 783 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms