RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 DEFB132Q7Z7B7 95 aa25.91■■□□□ 1.74
CENPA-201ENST00000233505 RGPD1P0DJD0 1748 aa25.89■■□□□ 1.74
CENPA-201ENST00000233505 FAM196AQ6ZSG2 479 aa25.89■■□□□ 1.74
CENPA-201ENST00000233505 RGPD2P0DJD1 1756 aa25.88■■□□□ 1.73
CENPA-201ENST00000233505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.88■■□□□ 1.73
CENPA-201ENST00000233505 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
CENPA-201ENST00000233505 MARCH10Q8NA82 808 aaPredicted RBP25.87■■□□□ 1.73
CENPA-201ENST00000233505 ZCRB1Q8TBF4 217 aaKnown RBP25.87■■□□□ 1.73
CENPA-201ENST00000233505 SULT6B1Q6IMI4 303 aa25.84■■□□□ 1.73
CENPA-201ENST00000233505 NUDCQ9Y266 331 aa25.84■■□□□ 1.73
CENPA-201ENST00000233505 AEBP1Q8IUX7 1158 aa25.83■■□□□ 1.73
CENPA-201ENST00000233505 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
CENPA-201ENST00000233505 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
CENPA-201ENST00000233505 SPG7Q9UQ90 795 aa25.81■■□□□ 1.72
CENPA-201ENST00000233505 U2SURPO15042 1029 aaKnown RBP25.79■■□□□ 1.72
CENPA-201ENST00000233505 AMOTQ4VCS5 1084 aa25.79■■□□□ 1.72
CENPA-201ENST00000233505 PKD1L3Q7Z443 1732 aa25.79■■□□□ 1.72
CENPA-201ENST00000233505 DDX54Q8TDD1 881 aaKnown RBP25.78■■□□□ 1.72
CENPA-201ENST00000233505 ANP32CO43423 234 aa25.77■■□□□ 1.72
CENPA-201ENST00000233505 CYP27B1O15528 508 aa25.76■■□□□ 1.71
CENPA-201ENST00000233505 HMOX1P09601 288 aa25.76■■□□□ 1.71
CENPA-201ENST00000233505 BAG6P46379 1132 aa25.76■■□□□ 1.71
CENPA-201ENST00000233505 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
CENPA-201ENST00000233505 SHANK3Q9BYB0 1731 aa25.75■■□□□ 1.71
CENPA-201ENST00000233505 SRCAPQ6ZRS2 3230 aa25.75■■□□□ 1.71
CENPA-201ENST00000233505 TRIM37O94972 964 aa25.73■■□□□ 1.71
CENPA-201ENST00000233505 U2AF1L5P0DN76 240 aaPredicted RBP25.73■■□□□ 1.71
CENPA-201ENST00000233505 U2AF1Q01081 240 aaKnown RBP eCLIP25.73■■□□□ 1.71
CENPA-201ENST00000233505 EN1Q05925 392 aaPredicted RBP25.73■■□□□ 1.71
CENPA-201ENST00000233505 NKX1-1Q15270 411 aaPredicted RBP25.73■■□□□ 1.71
CENPA-201ENST00000233505 RSPH6AQ9H0K4 717 aa25.73■■□□□ 1.71
CENPA-201ENST00000233505 TNS1Q9HBL0 1735 aaKnown RBP25.73■■□□□ 1.71
CENPA-201ENST00000233505 FCHSD2O94868 740 aa25.72■■□□□ 1.71
CENPA-201ENST00000233505 IFNL2Q8IZJ0 200 aa25.72■■□□□ 1.71
CENPA-201ENST00000233505 BCL11BQ9C0K0 894 aaPredicted RBP25.72■■□□□ 1.71
CENPA-201ENST00000233505 PHKG2P15735 406 aa25.71■■□□□ 1.71
CENPA-201ENST00000233505 ZNF530Q6P9A1 599 aaPredicted RBP25.69■■□□□ 1.7
CENPA-201ENST00000233505 HSP90AB1P08238 724 aaKnown RBP25.68■■□□□ 1.7
CENPA-201ENST00000233505 PRKAR2BP31323 418 aa25.67■■□□□ 1.7
CENPA-201ENST00000233505 NHSQ6T4R5 1651 aa25.65■■□□□ 1.7
CENPA-201ENST00000233505 EZH2Q15910 746 aaKnown RBP25.65■■□□□ 1.7
CENPA-201ENST00000233505 C1orf141Q5JVX7 400 aa25.65■■□□□ 1.7
CENPA-201ENST00000233505 APBA3O96018 575 aa25.64■■□□□ 1.7
CENPA-201ENST00000233505 AKAP4Q5JQC9 854 aa25.64■■□□□ 1.7
CENPA-201ENST00000233505 GAS2L2Q8NHY3 880 aa25.64■■□□□ 1.7
CENPA-201ENST00000233505 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
CENPA-201ENST00000233505 DCAF5Q96JK2 942 aa25.64■■□□□ 1.7
CENPA-201ENST00000233505 PNNQ9H307 717 aaKnown RBP25.64■■□□□ 1.7
CENPA-201ENST00000233505 KCNQ2O43526 872 aa25.63■■□□□ 1.69
CENPA-201ENST00000233505 MTHFSDQ2M296 383 aaKnown RBP25.63■■□□□ 1.69
CENPA-201ENST00000233505 PSDA5PKW4 1024 aaPredicted RBP25.62■■□□□ 1.69
CENPA-201ENST00000233505 PRIM1P49642 420 aaKnown RBP25.61■■□□□ 1.69
CENPA-201ENST00000233505 PTF1AQ7RTS3 328 aa25.61■■□□□ 1.69
CENPA-201ENST00000233505 SBF2Q86WG5 1849 aa25.6■■□□□ 1.69
CENPA-201ENST00000233505 PLSCR1O15162 318 aa25.6■■□□□ 1.69
CENPA-201ENST00000233505 WDR43Q15061 677 aaKnown RBP eCLIP25.6■■□□□ 1.69
CENPA-201ENST00000233505 PHACTR3Q96KR7 559 aa25.6■■□□□ 1.69
CENPA-201ENST00000233505 CAMKK2Q96RR4 588 aa25.6■■□□□ 1.69
CENPA-201ENST00000233505 PLEKHF1Q96S99 279 aa25.6■■□□□ 1.69
CENPA-201ENST00000233505 KDM6AO15550 1401 aaPredicted RBP25.6■■□□□ 1.69
CENPA-201ENST00000233505 ERVV-2B6SEH9 535 aa25.59■■□□□ 1.69
CENPA-201ENST00000233505 DOT1LQ8TEK3 1739 aa25.57■■□□□ 1.68
CENPA-201ENST00000233505 NEFMP07197 916 aa25.57■■□□□ 1.68
CENPA-201ENST00000233505 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
CENPA-201ENST00000233505 SYTL4Q96C24 671 aaPredicted RBP25.56■■□□□ 1.68
CENPA-201ENST00000233505 TOGARAM1Q9Y4F4 1720 aa25.55■■□□□ 1.68
CENPA-201ENST00000233505 RGPD3A6NKT7 1758 aaPredicted RBP25.54■■□□□ 1.68
CENPA-201ENST00000233505 RGPD4Q7Z3J3 1758 aa25.54■■□□□ 1.68
CENPA-201ENST00000233505 GNAT3A8MTJ3 354 aa25.54■■□□□ 1.68
CENPA-201ENST00000233505 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
CENPA-201ENST00000233505 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
CENPA-201ENST00000233505 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
CENPA-201ENST00000233505 MPRIPQ6WCQ1 1025 aa25.53■■□□□ 1.68
CENPA-201ENST00000233505 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
CENPA-201ENST00000233505 ADAMTS8Q9UP79 889 aa25.53■■□□□ 1.68
CENPA-201ENST00000233505 MAPK8IP3Q9UPT6 1336 aa25.53■■□□□ 1.68
CENPA-201ENST00000233505 MRC1P22897 1456 aa25.53■■□□□ 1.68
CENPA-201ENST00000233505 PIGBQ92521 554 aa25.52■■□□□ 1.68
CENPA-201ENST00000233505 ADAMTS7Q9UKP4 1686 aa25.52■■□□□ 1.68
CENPA-201ENST00000233505 RNMTO43148 476 aaKnown RBP25.51■■□□□ 1.67
CENPA-201ENST00000233505 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
CENPA-201ENST00000233505 PNISRQ8TF01 805 aaKnown RBP25.51■■□□□ 1.67
CENPA-201ENST00000233505 RREB1Q92766 1687 aa25.51■■□□□ 1.67
CENPA-201ENST00000233505 NFE2L2Q16236 605 aa25.5■■□□□ 1.67
CENPA-201ENST00000233505 DIEXFQ68CQ4 756 aaKnown RBP25.5■■□□□ 1.67
CENPA-201ENST00000233505 CEMIPQ8WUJ3 1361 aa25.49■■□□□ 1.67
CENPA-201ENST00000233505 CABP4P57796 275 aa25.49■■□□□ 1.67
CENPA-201ENST00000233505 SMARCC1Q92922 1105 aaPredicted RBP25.49■■□□□ 1.67
CENPA-201ENST00000233505 BTAF1O14981 1849 aa25.49■■□□□ 1.67
CENPA-201ENST00000233505 RUNDC1Q96C34 613 aa25.48■■□□□ 1.67
CENPA-201ENST00000233505 NUP188Q5SRE5 1749 aa25.48■■□□□ 1.67
CENPA-201ENST00000233505 SLC52A2Q9HAB3 445 aa25.47■■□□□ 1.67
CENPA-201ENST00000233505 LGR6Q9HBX8 967 aa25.47■■□□□ 1.67
CENPA-201ENST00000233505 TXNRD1Q16881 649 aa25.46■■□□□ 1.67
CENPA-201ENST00000233505 SLC27A3Q5K4L6 730 aa25.46■■□□□ 1.67
CENPA-201ENST00000233505 IL17REQ8NFR9 667 aa25.46■■□□□ 1.67
CENPA-201ENST00000233505 PALLDQ8WX93 1383 aa25.45■■□□□ 1.67
CENPA-201ENST00000233505 PROM2Q8N271 834 aa25.45■■□□□ 1.66
CENPA-201ENST00000233505 RTF1Q92541 710 aaKnown RBP25.45■■□□□ 1.66
CENPA-201ENST00000233505 CCER2I3L3R5 266 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms