RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
TTC1-201ENST00000231238 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
TTC1-201ENST00000231238 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 RABGEF1Q9UJ41 708 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
TTC1-201ENST00000231238 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
TTC1-201ENST00000231238 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
TTC1-201ENST00000231238 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
TTC1-201ENST00000231238 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
TTC1-201ENST00000231238 PRSS12P56730 875 aa13.11□□□□□ -0.31
TTC1-201ENST00000231238 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
TTC1-201ENST00000231238 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
TTC1-201ENST00000231238 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
TTC1-201ENST00000231238 TECPR2O15040 1411 aa13.11□□□□□ -0.31
TTC1-201ENST00000231238 MYOM1P52179 1685 aa13.11□□□□□ -0.31
TTC1-201ENST00000231238 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
TTC1-201ENST00000231238 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
TTC1-201ENST00000231238 CPS1P31327 1500 aa13.1□□□□□ -0.31
TTC1-201ENST00000231238 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
TTC1-201ENST00000231238 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
TTC1-201ENST00000231238 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
TTC1-201ENST00000231238 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
TTC1-201ENST00000231238 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
TTC1-201ENST00000231238 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
TTC1-201ENST00000231238 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
TTC1-201ENST00000231238 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
TTC1-201ENST00000231238 MED14O60244 1454 aa13.08□□□□□ -0.31
TTC1-201ENST00000231238 PIK3R4Q99570 1358 aa13.08□□□□□ -0.32
TTC1-201ENST00000231238 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
TTC1-201ENST00000231238 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
TTC1-201ENST00000231238 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
TTC1-201ENST00000231238 PTGDRQ13258 359 aa13.08□□□□□ -0.32
TTC1-201ENST00000231238 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
TTC1-201ENST00000231238 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
TTC1-201ENST00000231238 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
TTC1-201ENST00000231238 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
TTC1-201ENST00000231238 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
TTC1-201ENST00000231238 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
TTC1-201ENST00000231238 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
TTC1-201ENST00000231238 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
TTC1-201ENST00000231238 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
TTC1-201ENST00000231238 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
TTC1-201ENST00000231238 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
TTC1-201ENST00000231238 KCNA6P17658 529 aa13.05□□□□□ -0.32
TTC1-201ENST00000231238 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
TTC1-201ENST00000231238 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
TTC1-201ENST00000231238 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
TTC1-201ENST00000231238 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
TTC1-201ENST00000231238 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
TTC1-201ENST00000231238 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
TTC1-201ENST00000231238 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
TTC1-201ENST00000231238 A0A1W2PP64 1363 aa13.03□□□□□ -0.32
TTC1-201ENST00000231238 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
TTC1-201ENST00000231238 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
TTC1-201ENST00000231238 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
TTC1-201ENST00000231238 WDR43Q15061 677 aaKnown RBP eCLIP13.02□□□□□ -0.33
TTC1-201ENST00000231238 NSD2O96028 1365 aa13.02□□□□□ -0.33
TTC1-201ENST00000231238 SMAPO00193 183 aa13.01□□□□□ -0.33
TTC1-201ENST00000231238 HSPA2P54652 639 aa13.01□□□□□ -0.33
TTC1-201ENST00000231238 ATP7BP35670 1465 aa13□□□□□ -0.33
TTC1-201ENST00000231238 GPR37O15354 613 aa13□□□□□ -0.33
TTC1-201ENST00000231238 LAPTM4BQ86VI4 370 aa13□□□□□ -0.33
TTC1-201ENST00000231238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
TTC1-201ENST00000231238 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
TTC1-201ENST00000231238 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
TTC1-201ENST00000231238 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
TTC1-201ENST00000231238 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
TTC1-201ENST00000231238 FCHSD2O94868 740 aa12.98□□□□□ -0.33
TTC1-201ENST00000231238 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
TTC1-201ENST00000231238 TATDN2Q93075 761 aa12.98□□□□□ -0.33
TTC1-201ENST00000231238 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
TTC1-201ENST00000231238 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
TTC1-201ENST00000231238 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
TTC1-201ENST00000231238 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
TTC1-201ENST00000231238 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
TTC1-201ENST00000231238 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
TTC1-201ENST00000231238 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
TTC1-201ENST00000231238 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
TTC1-201ENST00000231238 WNT2BQ93097 391 aa12.97□□□□□ -0.33
TTC1-201ENST00000231238 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
TTC1-201ENST00000231238 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
TTC1-201ENST00000231238 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
TTC1-201ENST00000231238 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
TTC1-201ENST00000231238 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
TTC1-201ENST00000231238 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
TTC1-201ENST00000231238 ACEP12821 1306 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 FYB1O15117 783 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 FECHP22830 423 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
TTC1-201ENST00000231238 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
TTC1-201ENST00000231238 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
TTC1-201ENST00000231238 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
TTC1-201ENST00000231238 COG3Q96JB2 828 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms