RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PCDHB15Q9Y5E8 787 aa21.47■■□□□ 1.03
GAPDH-201ENST00000229239 ARHGEF10O15013 1369 aa21.47■■□□□ 1.03
GAPDH-201ENST00000229239 KIF24Q5T7B8 1368 aa21.47■■□□□ 1.03
GAPDH-201ENST00000229239 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
GAPDH-201ENST00000229239 SBNO1A3KN83 1393 aa21.46■■□□□ 1.03
GAPDH-201ENST00000229239 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
GAPDH-201ENST00000229239 ARHGAP45Q92619 1136 aa21.46■■□□□ 1.03
GAPDH-201ENST00000229239 USP54Q70EL1 1684 aa21.46■■□□□ 1.03
GAPDH-201ENST00000229239 SPATA31A3Q5VYP0 1347 aa21.46■■□□□ 1.03
GAPDH-201ENST00000229239 HAP1P54257 671 aaPredicted RBP21.45■■□□□ 1.02
GAPDH-201ENST00000229239 C8orf34Q49A92 452 aa21.45■■□□□ 1.02
GAPDH-201ENST00000229239 FLT4P35916 1363 aa21.45■■□□□ 1.02
GAPDH-201ENST00000229239 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
GAPDH-201ENST00000229239 RGS3P49796 1198 aa21.45■■□□□ 1.02
GAPDH-201ENST00000229239 VAMP4O75379 141 aa21.44■■□□□ 1.02
GAPDH-201ENST00000229239 ZNF772Q68DY9 489 aaPredicted RBP21.44■■□□□ 1.02
GAPDH-201ENST00000229239 DLG5Q8TDM6 1919 aa21.44■■□□□ 1.02
GAPDH-201ENST00000229239 SULT6B1Q6IMI4 303 aa21.43■■□□□ 1.02
GAPDH-201ENST00000229239 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
GAPDH-201ENST00000229239 HDAC1Q13547 482 aaPredicted RBP21.43■■□□□ 1.02
GAPDH-201ENST00000229239 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
GAPDH-201ENST00000229239 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
GAPDH-201ENST00000229239 PIK3C2AO00443 1686 aa21.42■■□□□ 1.02
GAPDH-201ENST00000229239 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
GAPDH-201ENST00000229239 NPM2Q86SE8 214 aaKnown RBP21.41■■□□□ 1.02
GAPDH-201ENST00000229239 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
GAPDH-201ENST00000229239 AFF2P51816 1311 aa21.4■■□□□ 1.02
GAPDH-201ENST00000229239 HSP90AB2PQ58FF8 381 aa21.4■■□□□ 1.02
GAPDH-201ENST00000229239 MRPL50Q8N5N7 158 aaKnown RBP21.4■■□□□ 1.02
GAPDH-201ENST00000229239 NGLY1Q96IV0 654 aa21.4■■□□□ 1.02
GAPDH-201ENST00000229239 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
GAPDH-201ENST00000229239 LMOD2Q6P5Q4 547 aa21.39■■□□□ 1.02
GAPDH-201ENST00000229239 KDRP35968 1356 aa21.39■■□□□ 1.01
GAPDH-201ENST00000229239 TNS3Q68CZ2 1445 aa21.39■■□□□ 1.01
GAPDH-201ENST00000229239 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
GAPDH-201ENST00000229239 MARF1Q9Y4F3 1742 aaKnown RBP21.39■■□□□ 1.01
GAPDH-201ENST00000229239 TWISTNBQ3B726 338 aaPredicted RBP21.38■■□□□ 1.01
GAPDH-201ENST00000229239 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
GAPDH-201ENST00000229239 ZBTB40Q9NUA8 1239 aa21.38■■□□□ 1.01
GAPDH-201ENST00000229239 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
GAPDH-201ENST00000229239 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
GAPDH-201ENST00000229239 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
GAPDH-201ENST00000229239 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
GAPDH-201ENST00000229239 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
GAPDH-201ENST00000229239 AMPHP49418 695 aa21.35■■□□□ 1.01
GAPDH-201ENST00000229239 NLRP6P59044 892 aa21.35■■□□□ 1.01
GAPDH-201ENST00000229239 CHL1O00533 1208 aa21.34■■□□□ 1.01
GAPDH-201ENST00000229239 TSPYL6Q8N831 410 aa21.34■■□□□ 1.01
GAPDH-201ENST00000229239 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
GAPDH-201ENST00000229239 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
GAPDH-201ENST00000229239 FAM83GA6ND36 823 aa21.33■■□□□ 1.01
GAPDH-201ENST00000229239 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
GAPDH-201ENST00000229239 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
GAPDH-201ENST00000229239 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
GAPDH-201ENST00000229239 ABCC4O15439 1325 aa21.32■■□□□ 1
GAPDH-201ENST00000229239 FNBP4Q8N3X1 1017 aaPredicted RBP21.32■■□□□ 1
GAPDH-201ENST00000229239 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
GAPDH-201ENST00000229239 RXRBP28702 533 aa21.32■■□□□ 1
GAPDH-201ENST00000229239 SMC5Q8IY18 1101 aa21.32■■□□□ 1
GAPDH-201ENST00000229239 GAS2L2Q8NHY3 880 aa21.32■■□□□ 1
GAPDH-201ENST00000229239 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
GAPDH-201ENST00000229239 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
GAPDH-201ENST00000229239 USP21Q9UK80 565 aa21.31■■□□□ 1
GAPDH-201ENST00000229239 CRB1P82279 1406 aa21.3■■□□□ 1
GAPDH-201ENST00000229239 ABCA3Q99758 1704 aa21.3■■□□□ 1
GAPDH-201ENST00000229239 SOX12O15370 315 aa21.29■■□□□ 1
GAPDH-201ENST00000229239 DCTN1Q14203 1278 aa21.29■■□□□ 1
GAPDH-201ENST00000229239 ABTB2Q8N961 1025 aa21.29■■□□□ 1
GAPDH-201ENST00000229239 HOXC9P31274 260 aa21.28■■□□□ 1
GAPDH-201ENST00000229239 EYA1Q99502 592 aa21.28■■□□□ 1
GAPDH-201ENST00000229239 ALS2Q96Q42 1657 aa21.28■■□□□ 1
GAPDH-201ENST00000229239 ZBTB7BO15156 539 aaPredicted RBP21.28■■□□□ 1
GAPDH-201ENST00000229239 RTF1Q92541 710 aaKnown RBP21.28■■□□□ 1
GAPDH-201ENST00000229239 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
GAPDH-201ENST00000229239 MTHFSDQ2M296 383 aaKnown RBP21.26■□□□□ 0.99
GAPDH-201ENST00000229239 DAXXQ9UER7 740 aaPredicted RBP21.26■□□□□ 0.99
GAPDH-201ENST00000229239 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
GAPDH-201ENST00000229239 ELL2O00472 640 aaPredicted RBP21.25■□□□□ 0.99
GAPDH-201ENST00000229239 MCM10Q7L590 875 aa21.25■□□□□ 0.99
GAPDH-201ENST00000229239 BCL9LQ86UU0 1499 aa21.25■□□□□ 0.99
GAPDH-201ENST00000229239 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.25■□□□□ 0.99
GAPDH-201ENST00000229239 ATRNO75882 1429 aa21.24■□□□□ 0.99
GAPDH-201ENST00000229239 UPF2Q9HAU5 1272 aaKnown RBP21.24■□□□□ 0.99
GAPDH-201ENST00000229239 PTPRCP08575 1304 aa21.23■□□□□ 0.99
GAPDH-201ENST00000229239 KCNH5Q8NCM2 988 aa21.23■□□□□ 0.99
GAPDH-201ENST00000229239 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
GAPDH-201ENST00000229239 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 RGS12O14924 1447 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
GAPDH-201ENST00000229239 LRRC37A3O60309 1634 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 SLIT2O94813 1529 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 NUCB1Q02818 461 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
GAPDH-201ENST00000229239 PHRF1Q9P1Y6 1649 aaKnown RBP21.21■□□□□ 0.99
GAPDH-201ENST00000229239 NUTM2GQ5VZR2 741 aa21.21■□□□□ 0.99
GAPDH-201ENST00000229239 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
GAPDH-201ENST00000229239 UNC5CLQ8IV45 518 aa21.21■□□□□ 0.99
GAPDH-201ENST00000229239 NFAT5O94916 1531 aa21.21■□□□□ 0.99
GAPDH-201ENST00000229239 IP6K1Q92551 441 aa21.2■□□□□ 0.98
GAPDH-201ENST00000229239 USP19O94966 1318 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms