RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PLEKHG3A1L390 1219 aa20.24■□□□□ 0.83
LTBR-201ENST00000228918 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
LTBR-201ENST00000228918 USP31Q70CQ4 1352 aa20.24■□□□□ 0.83
LTBR-201ENST00000228918 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
LTBR-201ENST00000228918 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
LTBR-201ENST00000228918 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
LTBR-201ENST00000228918 MCM10Q7L590 875 aa20.23■□□□□ 0.83
LTBR-201ENST00000228918 GZF1Q9H116 711 aaPredicted RBP20.23■□□□□ 0.83
LTBR-201ENST00000228918 MSH6P52701 1360 aa20.23■□□□□ 0.83
LTBR-201ENST00000228918 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 K7ELQ4 463 aaPredicted RBP20.22■□□□□ 0.83
LTBR-201ENST00000228918 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 TNPO1Q92973 898 aaKnown RBP20.22■□□□□ 0.83
LTBR-201ENST00000228918 CRB1P82279 1406 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 PTPRCP08575 1304 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 XRCC6P12956 609 aaKnown RBP eCLIP20.22■□□□□ 0.83
LTBR-201ENST00000228918 RAB3GAP1Q15042 981 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 TTC22Q5TAA0 569 aa20.22■□□□□ 0.83
LTBR-201ENST00000228918 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
LTBR-201ENST00000228918 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
LTBR-201ENST00000228918 CEP85Q6P2H3 762 aa20.2■□□□□ 0.82
LTBR-201ENST00000228918 RPAP2Q8IXW5 612 aaPredicted RBP20.2■□□□□ 0.82
LTBR-201ENST00000228918 ARHGEF10O15013 1369 aa20.2■□□□□ 0.82
LTBR-201ENST00000228918 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
LTBR-201ENST00000228918 RIMS1Q86UR5 1692 aaKnown RBP20.18■□□□□ 0.82
LTBR-201ENST00000228918 NUTM2FA1L443 756 aa20.18■□□□□ 0.82
LTBR-201ENST00000228918 GBP4Q96PP9 640 aa20.18■□□□□ 0.82
LTBR-201ENST00000228918 ARXQ96QS3 562 aa20.18■□□□□ 0.82
LTBR-201ENST00000228918 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
LTBR-201ENST00000228918 LTKP29376 864 aa20.17■□□□□ 0.82
LTBR-201ENST00000228918 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
LTBR-201ENST00000228918 HSP90AA1P07900 732 aaKnown RBP20.16■□□□□ 0.82
LTBR-201ENST00000228918 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
LTBR-201ENST00000228918 MEIS3Q99687 375 aa20.16■□□□□ 0.82
LTBR-201ENST00000228918 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
LTBR-201ENST00000228918 TTC21AQ8NDW8 1320 aa20.15■□□□□ 0.82
LTBR-201ENST00000228918 GAS2L2Q8NHY3 880 aa20.15■□□□□ 0.82
LTBR-201ENST00000228918 KDRP35968 1356 aa20.14■□□□□ 0.82
LTBR-201ENST00000228918 PANK2Q9BZ23 570 aa20.14■□□□□ 0.81
LTBR-201ENST00000228918 FOXD4L1Q9NU39 408 aa20.14■□□□□ 0.81
LTBR-201ENST00000228918 SBNO1A3KN83 1393 aa20.14■□□□□ 0.81
LTBR-201ENST00000228918 MRE11P49959 708 aa20.14■□□□□ 0.81
LTBR-201ENST00000228918 RABEP1Q15276 862 aa20.14■□□□□ 0.81
LTBR-201ENST00000228918 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
LTBR-201ENST00000228918 FLT4P35916 1363 aa20.13■□□□□ 0.81
LTBR-201ENST00000228918 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
LTBR-201ENST00000228918 SOX12O15370 315 aa20.13■□□□□ 0.81
LTBR-201ENST00000228918 PTMSP20962 102 aa20.13■□□□□ 0.81
LTBR-201ENST00000228918 FOXO3O43524 673 aa20.12■□□□□ 0.81
LTBR-201ENST00000228918 MTHFSDQ2M296 383 aaKnown RBP20.12■□□□□ 0.81
LTBR-201ENST00000228918 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
LTBR-201ENST00000228918 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
LTBR-201ENST00000228918 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
LTBR-201ENST00000228918 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
LTBR-201ENST00000228918 SDSP20132 328 aa20.11■□□□□ 0.81
LTBR-201ENST00000228918 RRAGDQ9NQL2 400 aaPredicted RBP20.11■□□□□ 0.81
LTBR-201ENST00000228918 MIS18AQ9NYP9 233 aa20.11■□□□□ 0.81
LTBR-201ENST00000228918 TSPYL4Q9UJ04 414 aa20.11■□□□□ 0.81
LTBR-201ENST00000228918 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
LTBR-201ENST00000228918 PIK3C2AO00443 1686 aa20.11■□□□□ 0.81
LTBR-201ENST00000228918 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
LTBR-201ENST00000228918 DIP2AQ14689 1571 aa20.1■□□□□ 0.81
LTBR-201ENST00000228918 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
LTBR-201ENST00000228918 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
LTBR-201ENST00000228918 IGSF1Q8N6C5 1336 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 FAM208AQ9UK61 1670 aaKnown RBP20.09■□□□□ 0.81
LTBR-201ENST00000228918 SSFA2P28290 1259 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 CLEC17AQ6ZS10 378 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 G2E3Q7L622 706 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 SLC26A8Q96RN1 970 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 HMMRO75330 724 aa20.09■□□□□ 0.81
LTBR-201ENST00000228918 APBB1O00213 710 aa20.08■□□□□ 0.81
LTBR-201ENST00000228918 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.81
LTBR-201ENST00000228918 SLIT1O75093 1534 aa20.08■□□□□ 0.8
LTBR-201ENST00000228918 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
LTBR-201ENST00000228918 AK9Q5TCS8 1911 aa20.07■□□□□ 0.8
LTBR-201ENST00000228918 ARHGAP23Q9P227 1491 aa20.07■□□□□ 0.8
LTBR-201ENST00000228918 F6X3S4 739 aa20.06■□□□□ 0.8
LTBR-201ENST00000228918 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
LTBR-201ENST00000228918 TUBGCP6Q96RT7 1819 aa20.06■□□□□ 0.8
LTBR-201ENST00000228918 EYA1Q99502 592 aa20.06■□□□□ 0.8
LTBR-201ENST00000228918 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
LTBR-201ENST00000228918 SLC4A10Q6U841 1118 aa20.05■□□□□ 0.8
LTBR-201ENST00000228918 OSBPL3Q9H4L5 887 aa20.05■□□□□ 0.8
LTBR-201ENST00000228918 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
LTBR-201ENST00000228918 N4BP2Q86UW6 1770 aaPredicted RBP20.05■□□□□ 0.8
LTBR-201ENST00000228918 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
LTBR-201ENST00000228918 AMPHP49418 695 aa20.04■□□□□ 0.8
LTBR-201ENST00000228918 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
LTBR-201ENST00000228918 CACNA1FO60840 1977 aa20.03■□□□□ 0.8
LTBR-201ENST00000228918 REC8O95072 547 aa20.03■□□□□ 0.8
LTBR-201ENST00000228918 USP54Q70EL1 1684 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
LTBR-201ENST00000228918 BAG4O95429 457 aaKnown RBP20.02■□□□□ 0.8
LTBR-201ENST00000228918 GAS2L3Q86XJ1 694 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 GNAI2P04899 355 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms