RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ATP7BP35670 1465 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 NEK4P51957 841 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 NUCB2P80303 420 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 DCTPP1Q9H773 170 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 FAM135BQ49AJ0 1406 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 PNPLA6Q8IY17 1366 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 ERC2O15083 957 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
UBE2D4-201ENST00000222402 MYO3AQ8NEV4 1616 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 ZC3H13Q5T200 1668 aaKnown RBP18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
UBE2D4-201ENST00000222402 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 ABCC4O15439 1325 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 CHL1O00533 1208 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 LTKP29376 864 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
UBE2D4-201ENST00000222402 FLIIQ13045 1269 aa18.28■□□□□ 0.52
UBE2D4-201ENST00000222402 SDSP20132 328 aa18.28■□□□□ 0.52
UBE2D4-201ENST00000222402 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
UBE2D4-201ENST00000222402 SSFA2P28290 1259 aa18.28■□□□□ 0.52
UBE2D4-201ENST00000222402 EYA1Q99502 592 aa18.28■□□□□ 0.52
UBE2D4-201ENST00000222402 G2E3Q7L622 706 aa18.27■□□□□ 0.52
UBE2D4-201ENST00000222402 SNX21Q969T3 373 aa18.27■□□□□ 0.52
UBE2D4-201ENST00000222402 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.52
UBE2D4-201ENST00000222402 ZNF853P0CG23 659 aa18.27■□□□□ 0.52
UBE2D4-201ENST00000222402 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
UBE2D4-201ENST00000222402 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
UBE2D4-201ENST00000222402 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
UBE2D4-201ENST00000222402 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
UBE2D4-201ENST00000222402 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
UBE2D4-201ENST00000222402 LRRC7Q96NW7 1537 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 SIRT2Q8IXJ6 389 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 MSH6P52701 1360 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 MED14O60244 1454 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 TAF7Q15545 349 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-201ENST00000222402 SRCIN1Q9C0H9 1055 aa18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 ROBO2Q9HCK4 1378 aa18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 FLT4P35916 1363 aa18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 ZNF530Q6P9A1 599 aaPredicted RBP18.24■□□□□ 0.51
UBE2D4-201ENST00000222402 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
UBE2D4-201ENST00000222402 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
UBE2D4-201ENST00000222402 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
UBE2D4-201ENST00000222402 CAVIN1Q6NZI2 390 aaKnown RBP18.23■□□□□ 0.51
UBE2D4-201ENST00000222402 MX1P20591 662 aa18.23■□□□□ 0.51
UBE2D4-201ENST00000222402 IFT172Q9UG01 1749 aa18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 PLCB2Q00722 1185 aa18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
UBE2D4-201ENST00000222402 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 PANK2Q9BZ23 570 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 PHF8Q9UPP1 1060 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
UBE2D4-201ENST00000222402 PDE1AP54750 535 aa18.2■□□□□ 0.5
UBE2D4-201ENST00000222402 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
UBE2D4-201ENST00000222402 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
UBE2D4-201ENST00000222402 KCNA6P17658 529 aa18.19■□□□□ 0.5
UBE2D4-201ENST00000222402 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-201ENST00000222402 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-201ENST00000222402 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 ANXA1P04083 346 aa18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 USP32Q8NFA0 1604 aa18.18■□□□□ 0.5
UBE2D4-201ENST00000222402 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 BTBD11A6QL63 1104 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 TMEM131LA2VDJ0 1609 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 FGD1P98174 961 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 PTCH1Q13635 1447 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms