RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
TM9SF4-201ENST00000217315 GORABQ5T7V8 394 aa15.02■□□□□ -0
TM9SF4-201ENST00000217315 PROSER2Q86WR7 435 aaPredicted RBP15.02■□□□□ -0
TM9SF4-201ENST00000217315 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
TM9SF4-201ENST00000217315 PTPRCP08575 1304 aa15.02□□□□□ -0.01
TM9SF4-201ENST00000217315 PRPF40AO75400 957 aaKnown RBP15.02□□□□□ -0.01
TM9SF4-201ENST00000217315 GLIPR1L2Q4G1C9 344 aa15.02□□□□□ -0.01
TM9SF4-201ENST00000217315 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 MTHFSDQ2M296 383 aaKnown RBP15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
TM9SF4-201ENST00000217315 BTBD11A6QL63 1104 aa15□□□□□ -0.01
TM9SF4-201ENST00000217315 HSP90B1P14625 803 aaKnown RBP15□□□□□ -0.01
TM9SF4-201ENST00000217315 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
TM9SF4-201ENST00000217315 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
TM9SF4-201ENST00000217315 CNTROBQ8N137 903 aa15□□□□□ -0.01
TM9SF4-201ENST00000217315 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
TM9SF4-201ENST00000217315 TNPO1Q92973 898 aaKnown RBP15□□□□□ -0.01
TM9SF4-201ENST00000217315 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
TM9SF4-201ENST00000217315 ABCC3O15438 1527 aa15□□□□□ -0.01
TM9SF4-201ENST00000217315 EDC4Q6P2E9 1401 aaKnown RBP14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 ATF3P18847 181 aa14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 MX1P20591 662 aa14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 TAF7LQ5H9L4 462 aa14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 TTC22Q5TAA0 569 aa14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 MPRIPQ6WCQ1 1025 aa14.99□□□□□ -0.01
TM9SF4-201ENST00000217315 SSFA2P28290 1259 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 ANXA1P04083 346 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 SDSP20132 328 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 EYA1Q99502 592 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 SMC3Q9UQE7 1217 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
TM9SF4-201ENST00000217315 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 VPS37CA5D8V6 355 aaPredicted RBP14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 SIL1Q9H173 461 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 GRPEL1Q9HAV7 217 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 ABCA6Q8N139 1617 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 RNF214Q8ND24 703 aa14.97□□□□□ -0.01
TM9SF4-201ENST00000217315 LAMC1P11047 1609 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 METP08581 1390 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 PHF14O94880 888 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 MYL6BP14649 208 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 MCM2P49736 904 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 ATP6V1DQ9Y5K8 247 aa14.96□□□□□ -0.01
TM9SF4-201ENST00000217315 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 G2E3Q7L622 706 aa14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 CWC22Q9HCG8 908 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 TTC21AQ8NDW8 1320 aa14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 PLEKHM2Q8IWE5 1019 aa14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 CWC27Q6UX04 472 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 DRC7Q8IY82 874 aa14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
TM9SF4-201ENST00000217315 KCNH5Q8NCM2 988 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 FSD1Q9BTV5 496 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 CHL1O00533 1208 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 KCNA6P17658 529 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 LTKP29376 864 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
TM9SF4-201ENST00000217315 KIAA2012Q0VF49 1180 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 ABCA9Q8IUA7 1624 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 CFAP74Q9C0B2 1584 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 FLT4P35916 1363 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 PI4KAP2A4QPH2 592 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 PI4KAP1Q8N8J0 262 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 NEUROD6Q96NK8 337 aa14.93□□□□□ -0.02
TM9SF4-201ENST00000217315 PDE1AP54750 535 aa14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 RNF20Q5VTR2 975 aa14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 DNAAF4Q8WXU2 420 aa14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 EVA1CP58658 441 aa14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 KIF1BPQ96EK5 621 aa14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 TATP17735 454 aaPredicted RBP14.92□□□□□ -0.02
TM9SF4-201ENST00000217315 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
TM9SF4-201ENST00000217315 AACSQ86V21 672 aa14.91□□□□□ -0.02
TM9SF4-201ENST00000217315 FAM43AQ8N2R8 423 aa14.91□□□□□ -0.02
TM9SF4-201ENST00000217315 ADGRB3O60242 1522 aa14.91□□□□□ -0.02
TM9SF4-201ENST00000217315 CEP152O94986 1710 aa14.91□□□□□ -0.02
TM9SF4-201ENST00000217315 SNX21Q969T3 373 aa14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 H3BQV1 296 aa14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 PPRC1Q5VV67 1664 aaKnown RBP14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 ANO8Q9HCE9 1232 aaPredicted RBP14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 MSH6P52701 1360 aa14.9□□□□□ -0.02
TM9SF4-201ENST00000217315 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 TMEM2Q9UHN6 1383 aa14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 RBM25P49756 843 aaKnown RBP14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 TBX22Q9Y458 520 aa14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 FIBPO43427 364 aa14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 HTATSF1O43719 755 aaKnown RBP14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 DDX54Q8TDD1 881 aaKnown RBP14.89□□□□□ -0.03
TM9SF4-201ENST00000217315 DNAJC2Q99543 621 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms