RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-201ENST00000193403 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
ACTN1-201ENST00000193403 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
ACTN1-201ENST00000193403 IL16Q14005 1332 aa13.55□□□□□ -0.24
ACTN1-201ENST00000193403 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
ACTN1-201ENST00000193403 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-201ENST00000193403 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
ACTN1-201ENST00000193403 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-201ENST00000193403 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
ACTN1-201ENST00000193403 AMPHP49418 695 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 ZNF445P59923 1031 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 IGSF3O75054 1194 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 FGD1P98174 961 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
ACTN1-201ENST00000193403 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 POLKQ9UBT6 870 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 MADDQ8WXG6 1647 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
ACTN1-201ENST00000193403 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
ACTN1-201ENST00000193403 RTEL1-TNFRSF6BF6WH68 1400 aa13.52□□□□□ -0.24
ACTN1-201ENST00000193403 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
ACTN1-201ENST00000193403 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
ACTN1-201ENST00000193403 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
ACTN1-201ENST00000193403 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 RPAP2Q8IXW5 612 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-201ENST00000193403 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-201ENST00000193403 CDC42BPBQ9Y5S2 1711 aa13.51□□□□□ -0.25
ACTN1-201ENST00000193403 IQGAP3Q86VI3 1631 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 ADCY5O95622 1261 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 NCKAP5LQ9HCH0 1330 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 DDIT3P35638 169 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 NSD2O96028 1365 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 ANKRD44Q8N8A2 993 aa13.5□□□□□ -0.25
ACTN1-201ENST00000193403 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 FERMT3Q86UX7 667 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 FBXW7Q969H0 707 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-201ENST00000193403 UNC13BO14795 1591 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 FOSBP53539 338 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 GIMAP6Q6P9H5 292 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
ACTN1-201ENST00000193403 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
ACTN1-201ENST00000193403 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 PDE1AP54750 535 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 TRPM2O94759 1503 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 GNAI2P04899 355 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 CAMK4Q16566 473 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 MTERF4Q7Z6M4 381 aaKnown RBP13.48□□□□□ -0.25
ACTN1-201ENST00000193403 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
ACTN1-201ENST00000193403 MX1P20591 662 aa13.47□□□□□ -0.25
ACTN1-201ENST00000193403 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
ACTN1-201ENST00000193403 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
ACTN1-201ENST00000193403 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
ACTN1-201ENST00000193403 ZNF771Q7L3S4 317 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-201ENST00000193403 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
ACTN1-201ENST00000193403 LAMC1P11047 1609 aa13.47□□□□□ -0.25
ACTN1-201ENST00000193403 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
ACTN1-201ENST00000193403 MSH6P52701 1360 aa13.46□□□□□ -0.25
ACTN1-201ENST00000193403 CPA1P15085 419 aa13.46□□□□□ -0.25
ACTN1-201ENST00000193403 MCM2P49736 904 aa13.46□□□□□ -0.25
ACTN1-201ENST00000193403 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.258e-10■□□□□ 9.7
ACTN1-201ENST00000193403 DIAPH3Q9NSV4 1193 aa13.46□□□□□ -0.25
ACTN1-201ENST00000193403 GOLGA6L6A8MZA4 724 aa13.46□□□□□ -0.26
ACTN1-201ENST00000193403 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.26
ACTN1-201ENST00000193403 NPHP1O15259 732 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 G2E3Q7L622 706 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
ACTN1-201ENST00000193403 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
ACTN1-201ENST00000193403 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-201ENST00000193403 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
ACTN1-201ENST00000193403 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-201ENST00000193403 IQSEC2Q5JU85 1478 aa13.44□□□□□ -0.26
ACTN1-201ENST00000193403 ABCC4O15439 1325 aa13.44□□□□□ -0.26
ACTN1-201ENST00000193403 PDCL2Q8N4E4 241 aa13.44□□□□□ -0.26
ACTN1-201ENST00000193403 SBNO2Q9Y2G9 1366 aa13.44□□□□□ -0.26
ACTN1-201ENST00000193403 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 LRRFIP2Q9Y608 721 aaKnown RBP13.43□□□□□ -0.26
ACTN1-201ENST00000193403 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 FOXO3O43524 673 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms