RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 TMX3Q96JJ7 454 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 KIF2CQ99661 725 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 NAP1L2Q9ULW6 460 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-201ENST00000175756 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
PTPN18-201ENST00000175756 TSPY26PQ9H489 355 aa20.79■□□□□ 0.92
PTPN18-201ENST00000175756 ZNF830Q96NB3 372 aaPredicted RBP20.78■□□□□ 0.92
PTPN18-201ENST00000175756 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
PTPN18-201ENST00000175756 G2E3Q7L622 706 aa20.77■□□□□ 0.92
PTPN18-201ENST00000175756 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
PTPN18-201ENST00000175756 MBD3O95983 291 aa20.77■□□□□ 0.92
PTPN18-201ENST00000175756 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
PTPN18-201ENST00000175756 PHF14O94880 888 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 CCDC39Q9UFE4 941 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 CCDC9Q9Y3X0 531 aaKnown RBP20.76■□□□□ 0.91
PTPN18-201ENST00000175756 IL13P35225 146 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 FGD1P98174 961 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 PUS7Q96PZ0 661 aaKnown RBP20.76■□□□□ 0.91
PTPN18-201ENST00000175756 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 PDE1AP54750 535 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 LMBRD1Q9NUN5 540 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 ZFYVE16Q7Z3T8 1539 aa20.76■□□□□ 0.91
PTPN18-201ENST00000175756 HDGFP51858 240 aaKnown RBP20.75■□□□□ 0.91
PTPN18-201ENST00000175756 MYOM2P54296 1465 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 ABCA6Q8N139 1617 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 MX1P20591 662 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 SMC3Q9UQE7 1217 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
PTPN18-201ENST00000175756 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
PTPN18-201ENST00000175756 DIAPH3Q9NSV4 1193 aa20.74■□□□□ 0.91
PTPN18-201ENST00000175756 SPC24Q8NBT2 197 aa20.74■□□□□ 0.91
PTPN18-201ENST00000175756 LRRFIP2Q9Y608 721 aaKnown RBP20.73■□□□□ 0.91
PTPN18-201ENST00000175756 GNAI3P08754 354 aa20.73■□□□□ 0.91
PTPN18-201ENST00000175756 CCT4P50991 539 aaKnown RBP20.73■□□□□ 0.91
PTPN18-201ENST00000175756 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
PTPN18-201ENST00000175756 CWC27Q6UX04 472 aaKnown RBP20.73■□□□□ 0.91
PTPN18-201ENST00000175756 USP25Q9UHP3 1055 aa20.72■□□□□ 0.91
PTPN18-201ENST00000175756 NLRP6P59044 892 aa20.72■□□□□ 0.91
PTPN18-201ENST00000175756 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
PTPN18-201ENST00000175756 TMEM63CQ9P1W3 806 aa20.72■□□□□ 0.91
PTPN18-201ENST00000175756 CHAF1AQ13111 956 aaPredicted RBP20.71■□□□□ 0.91
PTPN18-201ENST00000175756 MSH6P52701 1360 aa20.71■□□□□ 0.91
PTPN18-201ENST00000175756 ABCC4O15439 1325 aa20.71■□□□□ 0.91
PTPN18-201ENST00000175756 RNF17Q9BXT8 1623 aaKnown RBP20.7■□□□□ 0.91
PTPN18-201ENST00000175756 YTHDC2Q9H6S0 1430 aaKnown RBP20.7■□□□□ 0.9
PTPN18-201ENST00000175756 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 GPT2Q8TD30 523 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 PRDM10Q9NQV6 1147 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 ZCCHC11Q5TAX3 1644 aaKnown RBP20.69■□□□□ 0.9
PTPN18-201ENST00000175756 MCM2P49736 904 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 NSFL1CQ9UNZ2 370 aaKnown RBP20.69■□□□□ 0.9
PTPN18-201ENST00000175756 SPG7Q9UQ90 795 aa20.69■□□□□ 0.9
PTPN18-201ENST00000175756 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
PTPN18-201ENST00000175756 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
PTPN18-201ENST00000175756 KIF1BO60333 1816 aa20.68■□□□□ 0.9
PTPN18-201ENST00000175756 TET3O43151 1660 aa20.68■□□□□ 0.9
PTPN18-201ENST00000175756 OFD1O75665 1012 aa20.68■□□□□ 0.9
PTPN18-201ENST00000175756 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
PTPN18-201ENST00000175756 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 FOSBP53539 338 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 C9orf78Q9NZ63 289 aaPredicted RBP20.67■□□□□ 0.9
PTPN18-201ENST00000175756 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 CHD1O14646 1710 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 FLIIQ13045 1269 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 USHBP1Q8N6Y0 703 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 ESYT1Q9BSJ8 1104 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 PDCL3Q9H2J4 239 aa20.67■□□□□ 0.9
PTPN18-201ENST00000175756 ANXA1P04083 346 aa20.66■□□□□ 0.9
PTPN18-201ENST00000175756 PALD1Q9ULE6 856 aa20.66■□□□□ 0.9
PTPN18-201ENST00000175756 WDR33Q9C0J8 1336 aaKnown RBP20.66■□□□□ 0.9
PTPN18-201ENST00000175756 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
PTPN18-201ENST00000175756 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
PTPN18-201ENST00000175756 CEP152O94986 1710 aa20.65■□□□□ 0.9
PTPN18-201ENST00000175756 CPA1P15085 419 aa20.65■□□□□ 0.9
PTPN18-201ENST00000175756 USP48Q86UV5 1035 aa20.65■□□□□ 0.9
PTPN18-201ENST00000175756 TTC12Q9H892 705 aaPredicted RBP20.64■□□□□ 0.9
PTPN18-201ENST00000175756 ZNF445P59923 1031 aa20.64■□□□□ 0.89
PTPN18-201ENST00000175756 AIMP1Q12904 312 aaKnown RBP20.64■□□□□ 0.89
PTPN18-201ENST00000175756 CCDC83Q8IWF9 413 aa20.64■□□□□ 0.89
PTPN18-201ENST00000175756 ZKSCAN5Q9Y2L8 839 aa20.64■□□□□ 0.89
PTPN18-201ENST00000175756 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
PTPN18-201ENST00000175756 GADD45BO75293 160 aaPredicted RBP20.64■□□□□ 0.89
PTPN18-201ENST00000175756 IFIT2P09913 472 aaKnown RBP20.63■□□□□ 0.89
PTPN18-201ENST00000175756 C17orf53Q8N3J3 647 aaPredicted RBP20.63■□□□□ 0.89
PTPN18-201ENST00000175756 CNPY2Q9Y2B0 182 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 PTPRCP08575 1304 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 MTHFSDQ2M296 383 aaKnown RBP20.63■□□□□ 0.89
PTPN18-201ENST00000175756 FBXW7Q969H0 707 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 ATP6V1DQ9Y5K8 247 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 CASTP20810 708 aaKnown RBP20.63■□□□□ 0.89
PTPN18-201ENST00000175756 PPP1R9BQ96SB3 815 aa20.63■□□□□ 0.89
PTPN18-201ENST00000175756 TEFQ10587 303 aa20.62■□□□□ 0.89
PTPN18-201ENST00000175756 TSC1Q92574 1164 aa20.62■□□□□ 0.89
PTPN18-201ENST00000175756 MYOM1P52179 1685 aa20.62■□□□□ 0.89
PTPN18-201ENST00000175756 STK3Q13188 491 aa20.62■□□□□ 0.89
PTPN18-201ENST00000175756 ACEP12821 1306 aa20.62■□□□□ 0.89
PTPN18-201ENST00000175756 HSP90B1P14625 803 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms