RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 L1TD1Q5T7N2 865 aaKnown RBP14.84□□□□□ -0.03
CHPF2-201ENST00000035307 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 NKTRP30414 1462 aaKnown RBP14.84□□□□□ -0.03
CHPF2-201ENST00000035307 NSD2O96028 1365 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 ACSBG1Q96GR2 724 aa14.83□□□□□ -0.03
CHPF2-201ENST00000035307 NGLY1Q96IV0 654 aa14.83□□□□□ -0.03
CHPF2-201ENST00000035307 CFAP44Q96MT7 982 aa14.83□□□□□ -0.03
CHPF2-201ENST00000035307 SLAIN2Q9P270 581 aa14.83□□□□□ -0.03
CHPF2-201ENST00000035307 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
CHPF2-201ENST00000035307 TAF7Q15545 349 aaPredicted RBP14.83□□□□□ -0.04
CHPF2-201ENST00000035307 DDX49Q9Y6V7 483 aaKnown RBP14.83□□□□□ -0.04
CHPF2-201ENST00000035307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
CHPF2-201ENST00000035307 UBTFL1P0CB47 393 aaPredicted RBP14.83□□□□□ -0.04
CHPF2-201ENST00000035307 NFATC2IPQ8NCF5 419 aa14.83□□□□□ -0.04
CHPF2-201ENST00000035307 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
CHPF2-201ENST00000035307 TSHZ3Q63HK5 1081 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 NPHP3Q7Z494 1330 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 PLEKHG1Q9ULL1 1385 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 G2E3Q7L622 706 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 NINLQ9Y2I6 1382 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 KCNQ3O43525 872 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 NEXNQ0ZGT2 675 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
CHPF2-201ENST00000035307 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
CHPF2-201ENST00000035307 SPG7Q9UQ90 795 aa14.81□□□□□ -0.04
CHPF2-201ENST00000035307 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
CHPF2-201ENST00000035307 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
CHPF2-201ENST00000035307 ATP5J2-PTCD1G3V325 749 aa14.8□□□□□ -0.04
CHPF2-201ENST00000035307 GORABQ5T7V8 394 aa14.8□□□□□ -0.04
CHPF2-201ENST00000035307 ALKQ9UM73 1620 aa14.8□□□□□ -0.04
CHPF2-201ENST00000035307 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
CHPF2-201ENST00000035307 CAMSAP1Q5T5Y3 1602 aa14.8□□□□□ -0.04
CHPF2-201ENST00000035307 FLT4P35916 1363 aa14.79□□□□□ -0.04
CHPF2-201ENST00000035307 PUS7Q96PZ0 661 aaKnown RBP14.79□□□□□ -0.04
CHPF2-201ENST00000035307 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
CHPF2-201ENST00000035307 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
CHPF2-201ENST00000035307 ADGRB3O60242 1522 aa14.79□□□□□ -0.04
CHPF2-201ENST00000035307 NLRP1Q9C000 1473 aa14.79□□□□□ -0.04
CHPF2-201ENST00000035307 VAMP4O75379 141 aa14.78□□□□□ -0.04
CHPF2-201ENST00000035307 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
CHPF2-201ENST00000035307 ZBTB3Q9H5J0 574 aa14.78□□□□□ -0.04
CHPF2-201ENST00000035307 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
CHPF2-201ENST00000035307 ST18O60284 1047 aa14.78□□□□□ -0.04
CHPF2-201ENST00000035307 MEIS3Q99687 375 aa14.78□□□□□ -0.04
CHPF2-201ENST00000035307 CHPF2Q9P2E5 772 aa14.78□□□□□ -0.04
CHPF2-201ENST00000035307 GLI2P10070 1586 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 PI4KAP2A4QPH2 592 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 BICDL1Q6ZP65 573 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 PI4KAP1Q8N8J0 262 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 NPHP4O75161 1426 aaPredicted RBP14.77□□□□□ -0.04
CHPF2-201ENST00000035307 IP6K1Q92551 441 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 CHMP5Q9NZZ3 219 aa14.77□□□□□ -0.04
CHPF2-201ENST00000035307 SYNMO15061 1565 aa14.77□□□□□ -0.05
CHPF2-201ENST00000035307 FLIIQ13045 1269 aa14.76□□□□□ -0.05
CHPF2-201ENST00000035307 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
CHPF2-201ENST00000035307 NEUROD6Q96NK8 337 aa14.76□□□□□ -0.05
CHPF2-201ENST00000035307 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
CHPF2-201ENST00000035307 SEC24BO95487 1268 aa14.75□□□□□ -0.05
CHPF2-201ENST00000035307 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
CHPF2-201ENST00000035307 DDX58O95786 925 aaKnown RBP14.75□□□□□ -0.05
CHPF2-201ENST00000035307 SRCIN1Q9C0H9 1055 aa14.75□□□□□ -0.05
CHPF2-201ENST00000035307 SRGAP3O43295 1099 aa14.75□□□□□ -0.05
CHPF2-201ENST00000035307 GPTP24298 496 aa14.75□□□□□ -0.05
CHPF2-201ENST00000035307 MSNP26038 577 aaKnown RBP14.74□□□□□ -0.05
CHPF2-201ENST00000035307 MCTP1Q6DN14 999 aa14.74□□□□□ -0.05
CHPF2-201ENST00000035307 PIK3C2BO00750 1634 aa14.74□□□□□ -0.05
CHPF2-201ENST00000035307 CHD1LQ86WJ1 897 aa14.74□□□□□ -0.05
CHPF2-201ENST00000035307 LRRFIP2Q9Y608 721 aaKnown RBP14.74□□□□□ -0.05
CHPF2-201ENST00000035307 FOSBP53539 338 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 ZRSR1Q15695 479 aaKnown RBP14.73□□□□□ -0.05
CHPF2-201ENST00000035307 NUTM1Q86Y26 1132 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 IL17REQ8NFR9 667 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 PLEKHF1Q96S99 279 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 NEXMIFQ5QGS0 1516 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 PRAMEF22A3QJZ6 481 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 MYD88Q99836 296 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 NPC1L1Q9UHC9 1359 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 MROH1Q8NDA8 1641 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 MROH2AA6NES4 1674 aa14.73□□□□□ -0.05
CHPF2-201ENST00000035307 GNAI2P04899 355 aa14.72□□□□□ -0.05
CHPF2-201ENST00000035307 MPNDQ8N594 471 aa14.72□□□□□ -0.05
CHPF2-201ENST00000035307 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
CHPF2-201ENST00000035307 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
CHPF2-201ENST00000035307 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
CHPF2-201ENST00000035307 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
CHPF2-201ENST00000035307 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
CHPF2-201ENST00000035307 CDC45O75419 566 aa14.71□□□□□ -0.05
CHPF2-201ENST00000035307 CWF19L2Q2TBE0 894 aaKnown RBP14.71□□□□□ -0.05
CHPF2-201ENST00000035307 NEK4P51957 841 aa14.71□□□□□ -0.06
CHPF2-201ENST00000035307 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.06
CHPF2-201ENST00000035307 USP6P35125 1406 aa14.71□□□□□ -0.06
CHPF2-201ENST00000035307 PTPRUQ92729 1446 aa14.71□□□□□ -0.06
CHPF2-201ENST00000035307 LMTK2Q8IWU2 1503 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 G3BP1Q13283 466 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHPF2-201ENST00000035307 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
CHPF2-201ENST00000035307 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
CHPF2-201ENST00000035307 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 TRAK2O60296 914 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 IFIT2P09913 472 aaKnown RBP14.7□□□□□ -0.06
CHPF2-201ENST00000035307 ZCRB1Q8TBF4 217 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms