RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Rab11fip3Q8CHD8 1047 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Caskin1Q6P9K8 1431 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 U2af2P26369 475 aaKnown RBP11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tmem132eQ6IEE6 982 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Gigyf1Q99MR1 1044 aaKnown RBP11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tceal9Q9DD24 104 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Adamts12Q811B3 1600 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Plch2A2AP18 1501 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Mphosph10Q810V0 681 aaKnown RBP11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Gtpbp4Q99ME9 634 aaKnown RBP11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Slx4ipQ9D7Y9 413 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Pes1Q9EQ61 584 aaKnown RBP11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Nphp1Q9QY53 687 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Gapvd1Q6PAR5 1458 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Trim30aP15533 496 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Sparcl1P70663 650 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Kank4Q6P9J5 1016 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Dixdc1Q80Y83 711 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 FanciQ8K368 1330 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Cnnm3Q32NY4 713 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Ccne1Q61457 408 aa11.25□□□□□ -0.61
Usp28-203ENSMUST00000213874 Fhod3Q76LL6 1578 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Smc3Q9CW03 1217 aaKnown RBP11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 MlecQ6ZQI3 291 aaKnown RBP11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Kdm4aQ8BW72 1064 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Scaf11E9PZM7 1456 aaKnown RBP11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Abca16E9PWJ7 1678 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Zbtb3Q91X45 518 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Mroh2aD3Z750 1679 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Anapc15-psA0A140T8L6 141 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Cavin1O54724 392 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Cgnl1Q6AW69 1298 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tsr2Q8C8T8 191 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Edc3Q8K2D3 508 aaKnown RBP11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Ppp6r3Q922D4 844 aa11.24□□□□□ -0.61
Usp28-203ENSMUST00000213874 Zkscan16A2ALW2 728 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tpd52l1O54818 204 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Dmrt2Q8BG36 561 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Bcl11bQ99PV8 884 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Col17a1Q07563 1470 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Map7d2A2AG50 781 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Pa2g4P50580 394 aaKnown RBP11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 CebpzP53569 1052 aaKnown RBP11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Kif21bQ9QXL1 1668 aa11.23□□□□□ -0.61
Usp28-203ENSMUST00000213874 Znf521Q6KAS7 1311 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tulp4Q9JIL5 1547 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Atg4a-psA0A0G2JFS9 396 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 AppP12023 770 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Rps6ka5Q8C050 863 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Atg4aQ8C9S8 396 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Mlh1Q9JK91 760 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Nucb1Q02819 459 aaKnown RBP11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Hnrnpul1Q8VDM6 859 aaKnown RBP11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Cyp27a1Q9DBG1 533 aa11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Gnai2P08752 355 aaKnown RBP11.22□□□□□ -0.61
Usp28-203ENSMUST00000213874 Nup160Q9Z0W3 1402 aaKnown RBP11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Zap70P43404 618 aa11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Arhgap4B1AUY3 965 aa11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Nol8Q3UHX0 1147 aaKnown RBP11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Tmc1Q8R4P5 757 aa11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Chmp3Q9CQ10 224 aa11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 Sbno1Q689Z5 1390 aa11.21□□□□□ -0.61
Usp28-203ENSMUST00000213874 EspnlQ3UYR4 1005 aa11.21□□□□□ -0.62
Usp28-203ENSMUST00000213874 Bicd2Q921C5 820 aa11.21□□□□□ -0.62
Usp28-203ENSMUST00000213874 Il1rapl2Q9ERS6 686 aa11.21□□□□□ -0.62
Usp28-203ENSMUST00000213874 Kiaa1551Q5DTW7 1521 aa11.21□□□□□ -0.62
Usp28-203ENSMUST00000213874 Abcc2Q8VI47 1543 aa11.21□□□□□ -0.62
Usp28-203ENSMUST00000213874 1700017N19RikA0A087WPJ1 469 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Zscan25B2RX31 543 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Zfp251Q6PCX8 632 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Pnma3Q8JZW8 466 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Grpel1Q99LP6 217 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Adcy5P84309 1262 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Chpf2Q3UU43 768 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Brf1Q8CFK2 676 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 RestQ8VIG1 1082 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Adamts13Q769J6 1426 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Zkscan2G3X952 960 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Eif4a2P10630 407 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Ccdc66Q6NS45 935 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Nckap5lQ6GQX2 1323 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Zbtb21E9Q444 1094 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Gjb2Q00977 226 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Idi2Q8BFZ6 227 aa11.2□□□□□ -0.62
Usp28-203ENSMUST00000213874 Snx13Q6PHS6 957 aa11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 Prr29B1ARI9 187 aa11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 Ccdc155Q80VJ8 648 aa11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 Ttc21aQ8C0S4 1314 aa11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 Tpx2A2APB8 745 aaKnown RBP11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 LifrP42703 1092 aa11.19□□□□□ -0.62
Usp28-203ENSMUST00000213874 Cdc42bpaQ3UU96 1719 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Kif3aP28741 701 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Sh3bgrQ9WUZ7 214 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 A0A0U1RNP2 1173 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Gcc1Q9D4H2 778 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Rusc2Q80U22 1514 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Fam135bQ9DAI6 1403 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Myo3aQ8K3H5 1613 aa11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 DroshaQ5HZJ0 1373 aaKnown RBP11.18□□□□□ -0.62
Usp28-203ENSMUST00000213874 Zdhhc9P59268 364 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 161 ms