RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Kif23E9Q5G3 953 aa22.2■■□□□ 1.14
Trim54-202ENSMUST00000202769 Gm1979E9QAN3 267 aa22.2■■□□□ 1.14
Trim54-202ENSMUST00000202769 Gm5862K7N5V5 267 aa22.2■■□□□ 1.14
Trim54-202ENSMUST00000202769 Gm10220K7N660 267 aa22.2■■□□□ 1.14
Trim54-202ENSMUST00000202769 Gpr150Q8BL07 427 aa22.2■■□□□ 1.14
Trim54-202ENSMUST00000202769 Fam198bQ3UPI1 517 aa22.19■■□□□ 1.14
Trim54-202ENSMUST00000202769 Plin1Q8CGN5 517 aa22.19■■□□□ 1.14
Trim54-202ENSMUST00000202769 Tjp1P39447 1745 aaKnown RBP22.19■■□□□ 1.14
Trim54-202ENSMUST00000202769 Crb1Q8VHS2 1405 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 Zfp777B9EKF4 885 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 Gsdma3Q5Y4Y6 464 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 Slc5a1Q8C3K6 665 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 Akt1s1Q9D1F4 257 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 Phkg2Q9DB30 406 aa22.18■■□□□ 1.14
Trim54-202ENSMUST00000202769 En2P09066 324 aa22.17■■□□□ 1.14
Trim54-202ENSMUST00000202769 Ppp2r1aQ76MZ3 589 aa22.17■■□□□ 1.14
Trim54-202ENSMUST00000202769 Hmgb2P30681 210 aaKnown RBP22.16■■□□□ 1.14
Trim54-202ENSMUST00000202769 Asic4Q7TNS7 539 aa22.16■■□□□ 1.14
Trim54-202ENSMUST00000202769 HypkQ9CR41 129 aa22.16■■□□□ 1.14
Trim54-202ENSMUST00000202769 PalmQ9Z0P4 383 aa22.15■■□□□ 1.14
Trim54-202ENSMUST00000202769 Mcm10Q0VBD2 885 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 Ssfa2Q922B9 1252 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 Amotl1Q9D4H4 968 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 Pdzd9Q9D9M4 266 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 Mapk8ip2Q9ERE9 830 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 TnikP83510 1323 aa22.14■■□□□ 1.14
Trim54-202ENSMUST00000202769 Magea1O89006 320 aa22.14■■□□□ 1.13
Trim54-202ENSMUST00000202769 Magea5O89009 320 aa22.14■■□□□ 1.13
Trim54-202ENSMUST00000202769 Magea2Q9R2A2 320 aa22.14■■□□□ 1.13
Trim54-202ENSMUST00000202769 AtrnQ9WU60 1428 aa22.14■■□□□ 1.13
Trim54-202ENSMUST00000202769 Spef2Q8C9J3 1734 aa22.13■■□□□ 1.13
Trim54-202ENSMUST00000202769 Aox2Q5SGK3 1345 aa22.11■■□□□ 1.13
Trim54-202ENSMUST00000202769 Igsf1Q7TQA1 1317 aa22.11■■□□□ 1.13
Trim54-202ENSMUST00000202769 Ints5Q8CHT3 1018 aa22.11■■□□□ 1.13
Trim54-202ENSMUST00000202769 Hdac6Q9Z2V5 1149 aa22.11■■□□□ 1.13
Trim54-202ENSMUST00000202769 Chmp7Q8R1T1 451 aa22.1■■□□□ 1.13
Trim54-202ENSMUST00000202769 Trpc5Q9QX29 975 aa22.1■■□□□ 1.13
Trim54-202ENSMUST00000202769 Nlrp6Q91WS2 869 aa22.08■■□□□ 1.13
Trim54-202ENSMUST00000202769 Aebp2Q9Z248 504 aaKnown RBP22.07■■□□□ 1.12
Trim54-202ENSMUST00000202769 Bicdl1A0JNT9 577 aa22.06■■□□□ 1.12
Trim54-202ENSMUST00000202769 Tsen2Q6P7W5 460 aa22.06■■□□□ 1.12
Trim54-202ENSMUST00000202769 CoblQ5NBX1 1337 aaKnown RBP22.05■■□□□ 1.12
Trim54-202ENSMUST00000202769 MeiocA2AG06 965 aa22.05■■□□□ 1.12
Trim54-202ENSMUST00000202769 Trpm3Q5F4S9 1721 aa22.04■■□□□ 1.12
Trim54-202ENSMUST00000202769 Ubr2Q6WKZ8 1755 aa22.04■■□□□ 1.12
Trim54-202ENSMUST00000202769 Rab11fip3Q8CHD8 1047 aa22.04■■□□□ 1.12
Trim54-202ENSMUST00000202769 Atg3Q9CPX6 314 aa22.04■■□□□ 1.12
Trim54-202ENSMUST00000202769 Kcnq2Q9Z351 759 aa22.04■■□□□ 1.12
Trim54-202ENSMUST00000202769 Stk31Q99MW1 1018 aa22.03■■□□□ 1.12
Trim54-202ENSMUST00000202769 Emilin1Q99K41 1017 aa22.02■■□□□ 1.12
Trim54-202ENSMUST00000202769 GsdmaQ9EST1 446 aa22.02■■□□□ 1.12
Trim54-202ENSMUST00000202769 Nkx2-3P97334 362 aa22.01■■□□□ 1.11
Trim54-202ENSMUST00000202769 U2af1Q9D883 239 aaKnown RBP22.01■■□□□ 1.11
Trim54-202ENSMUST00000202769 IncenpQ9WU62 880 aa22.01■■□□□ 1.11
Trim54-202ENSMUST00000202769 Ubxn2bQ0KL01 331 aa22■■□□□ 1.11
Trim54-202ENSMUST00000202769 Jmjd4Q8BFT6 427 aa22■■□□□ 1.11
Trim54-202ENSMUST00000202769 Fchsd2Q3USJ8 740 aa21.99■■□□□ 1.11
Trim54-202ENSMUST00000202769 Jdp2P97875 163 aa21.98■■□□□ 1.11
Trim54-202ENSMUST00000202769 TmpoQ61033 693 aaKnown RBP21.98■■□□□ 1.11
Trim54-202ENSMUST00000202769 ErfeQ6PGN1 340 aa21.98■■□□□ 1.11
Trim54-202ENSMUST00000202769 Dcaf5Q80T85 946 aa21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Msh6P54276 1358 aaKnown RBP21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Kiaa1107Q80TK0 1369 aa21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Gm13023A2A8N2 498 aa21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Ccdc155Q80VJ8 648 aa21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Cap2Q9CYT6 476 aa21.97■■□□□ 1.11
Trim54-202ENSMUST00000202769 Snap23O09044 210 aa21.96■■□□□ 1.11
Trim54-202ENSMUST00000202769 Kcna3P16390 528 aa21.96■■□□□ 1.11
Trim54-202ENSMUST00000202769 NppbP40753 121 aa21.96■■□□□ 1.11
Trim54-202ENSMUST00000202769 Ric1Q69ZJ7 1422 aa21.95■■□□□ 1.1
Trim54-202ENSMUST00000202769 Smarcc1P97496 1104 aa21.95■■□□□ 1.1
Trim54-202ENSMUST00000202769 Cabp2Q9JLK4 216 aa21.95■■□□□ 1.1
Trim54-202ENSMUST00000202769 Msl1Q6PDM1 616 aa21.94■■□□□ 1.1
Trim54-202ENSMUST00000202769 Sos1Q62245 1319 aa21.94■■□□□ 1.1
Trim54-202ENSMUST00000202769 Tcerg1Q8CGF7 1100 aaKnown RBP21.93■■□□□ 1.1
Trim54-202ENSMUST00000202769 Zswim8Q3UHH1 1832 aaKnown RBP21.93■■□□□ 1.1
Trim54-202ENSMUST00000202769 Ubr3Q5U430 1889 aa21.92■■□□□ 1.1
Trim54-202ENSMUST00000202769 C4bP01029 1738 aa21.92■■□□□ 1.1
Trim54-202ENSMUST00000202769 Kndc1Q0KK55 1742 aa21.92■■□□□ 1.1
Trim54-202ENSMUST00000202769 Smg7Q5RJH6 1138 aaKnown RBP21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Chrna2Q91X60 512 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Mtfr1lQ9CWE0 289 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Anp32bQ9EST5 272 aaKnown RBP21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 AceP09470 1312 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Spata31d1bE9QA57 1361 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Abcc12Q80WJ6 1366 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Sned1Q70E20 1403 aa21.91■■□□□ 1.1
Trim54-202ENSMUST00000202769 Wdr66E9Q743 1299 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Tiam2Q6ZPF3 1715 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Miga2Q8BK03 593 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Col23a1Q8K4G2 532 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Sumf1Q8R0F3 372 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Lrp5Q91VN0 1614 aa21.9■■□□□ 1.1
Trim54-202ENSMUST00000202769 Q7TT23 1179 aa21.89■■□□□ 1.1
Trim54-202ENSMUST00000202769 Iqcf3Q9D498 203 aa21.89■■□□□ 1.1
Trim54-202ENSMUST00000202769 Col11a2Q64739 1736 aa21.88■■□□□ 1.09
Trim54-202ENSMUST00000202769 Q4VA45 678 aa21.88■■□□□ 1.09
Trim54-202ENSMUST00000202769 Hirip3Q8BLH7 601 aa21.88■■□□□ 1.09
Trim54-202ENSMUST00000202769 Efcab2Q9CQ46 164 aa21.88■■□□□ 1.09
Trim54-202ENSMUST00000202769 Prom2Q3UUY6 835 aa21.87■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms