RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Ccnl1Q52KE7 532 aaKnown RBP20.76■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Slc5a1Q8C3K6 665 aa20.75■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Kif23E9Q5G3 953 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Magea1O89006 320 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Magea5O89009 320 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 En2P09066 324 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Plin1Q8CGN5 517 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Slc12a5Q91V14 1138 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Nlrp6Q91WS2 869 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Magea2Q9R2A2 320 aa20.74■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 HypkQ9CR41 129 aa20.73■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 PappaQ8R4K8 1624 aa20.73■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Tns2Q8CGB6 1400 aa20.71■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.71■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Chmp7Q8R1T1 451 aa20.71■□□□□ 0.91
Hmgb1-208ENSMUST00000139443 Shank3Q4ACU6 1730 aa20.7■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Rab11fip3Q8CHD8 1047 aa20.7■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Phkg2Q9DB30 406 aa20.69■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Fam198bQ3UPI1 517 aa20.68■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Amotl1Q9D4H4 968 aa20.68■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Asic4Q7TNS7 539 aa20.67■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Akt1s1Q9D1F4 257 aa20.67■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Trpc5Q9QX29 975 aa20.67■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Ppp2r1aQ76MZ3 589 aa20.66■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 PalmQ9Z0P4 383 aa20.66■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Crb1Q8VHS2 1405 aa20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 TnikP83510 1323 aa20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Bicdl1A0JNT9 577 aa20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Ssfa2Q922B9 1252 aa20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Pdzd9Q9D9M4 266 aa20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Anp32bQ9EST5 272 aaKnown RBP20.65■□□□□ 0.9
Hmgb1-208ENSMUST00000139443 Igsf1Q7TQA1 1317 aa20.64■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Hdac6Q9Z2V5 1149 aa20.64■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Tsen2Q6P7W5 460 aa20.62■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Stk31Q99MW1 1018 aa20.62■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 IncenpQ9WU62 880 aa20.62■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 P2rx7Q9Z1M0 595 aa20.62■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 MeiocA2AG06 965 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Jdp2P97875 163 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Mcm10Q0VBD2 885 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Jmjd4Q8BFT6 427 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Mapk8ip2Q9ERE9 830 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Kcnq2Q9Z351 759 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 AtrnQ9WU60 1428 aa20.61■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Fchsd2Q3USJ8 740 aa20.6■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Tjp1P39447 1745 aaKnown RBP20.59■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 NppbP40753 121 aa20.59■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Spef2Q8C9J3 1734 aa20.58■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 U2af1Q9D883 239 aaKnown RBP20.58■□□□□ 0.89
Hmgb1-208ENSMUST00000139443 Aox2Q5SGK3 1345 aa20.57■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Ints5Q8CHT3 1018 aa20.57■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Chrna2Q91X60 512 aa20.57■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Iqcf3Q9D498 203 aa20.57■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 GsdmaQ9EST1 446 aa20.57■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Ubxn2bQ0KL01 331 aa20.56■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Wdr66E9Q743 1299 aa20.55■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Smarcc1P97496 1104 aa20.55■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 CoblQ5NBX1 1337 aaKnown RBP20.54■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Egfem1Q8C088 590 aa20.54■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Atg3Q9CPX6 314 aa20.54■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Smg7Q5RJH6 1138 aaKnown RBP20.53■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 TmpoQ61033 693 aaKnown RBP20.52■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Dcaf5Q80T85 946 aa20.52■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Ppm1fQ8CGA0 452 aa20.52■□□□□ 0.88
Hmgb1-208ENSMUST00000139443 Msl1Q6PDM1 616 aa20.51■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Emilin1Q99K41 1017 aa20.51■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 ErfeQ6PGN1 340 aa20.49■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Ccdc155Q80VJ8 648 aa20.49■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Aebp2Q9Z248 504 aaKnown RBP20.49■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Gm13023A2A8N2 498 aa20.48■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Mtfr1lQ9CWE0 289 aa20.48■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Cap2Q9CYT6 476 aa20.48■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Cabp2Q9JLK4 216 aa20.48■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Rtf1A2AQ19 715 aaKnown RBP20.47■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Kcna3P16390 528 aa20.47■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Trpm3Q5F4S9 1721 aa20.47■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Msh6P54276 1358 aaKnown RBP20.46■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Miga2Q8BK03 593 aa20.46■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Hirip3Q8BLH7 601 aa20.46■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 Ubr2Q6WKZ8 1755 aa20.46■□□□□ 0.87
Hmgb1-208ENSMUST00000139443 AceP09470 1312 aa20.45■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Ric1Q69ZJ7 1422 aa20.44■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Pde4dQ01063 747 aa20.44■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Sos1Q62245 1319 aa20.44■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Mapk8ip3Q9ESN9 1337 aa20.44■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Abcc12Q80WJ6 1366 aa20.44■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Tcerg1Q8CGF7 1100 aaKnown RBP20.43■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Efcab2Q9CQ46 164 aa20.43■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Spata31d1bE9QA57 1361 aa20.43■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Col23a1Q8K4G2 532 aa20.42■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Sumf1Q8R0F3 372 aa20.42■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 RtcbQ99LF4 505 aaKnown RBP20.42■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Snap23O09044 210 aa20.41■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 DiexfQ8BTT6 772 aaKnown RBP20.4■□□□□ 0.86
Hmgb1-208ENSMUST00000139443 Magea6O89010 325 aa20.39■□□□□ 0.85
Hmgb1-208ENSMUST00000139443 Nkx2-3P97334 362 aa20.39■□□□□ 0.85
Hmgb1-208ENSMUST00000139443 Magea3Q6T340 320 aa20.39■□□□□ 0.85
Hmgb1-208ENSMUST00000139443 Tiam2Q6ZPF3 1715 aa20.39■□□□□ 0.85
Hmgb1-208ENSMUST00000139443 Kiaa1107Q80TK0 1369 aa20.38■□□□□ 0.85
Hmgb1-208ENSMUST00000139443 Lrrc43Q3V0L5 667 aa20.38■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms