RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Paxip1Q6NZQ4 1056 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Ttc19Q8CC21 365 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Gm21663A0A0G2JE01 267 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 5031410I06RikE9Q4E0 267 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Gm1979E9QAN3 267 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Gm5862K7N5V5 267 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Gm10220K7N660 267 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Znf287Q9EQB9 759 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Cetn2Q9R1K9 172 aa14.53□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Abcf1Q6P542 837 aaKnown RBP14.52□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Fam163aQ8CAA5 168 aa14.52□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Speer4bQ9D9F7 267 aa14.52□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Asxl1P59598 1514 aa14.52□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Cc2d2aQ8CFW7 1633 aa14.52□□□□□ -0.08
Ssh1-202ENSMUST00000112298 Lrrfip2Q91WK0 415 aa14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Tspyl3Q3UYP3 334 aa14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Btbd11Q6GQW0 1109 aa14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Maco1Q7TQE6 664 aaKnown RBP14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Secisbp2lQ6A098 1086 aaKnown RBP14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Cfap69Q8BH53 942 aa14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Trim11Q99PQ2 467 aa14.52□□□□□ -0.09
Ssh1-202ENSMUST00000112298 ZgpatQ8VDM1 511 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Dhx9O70133 1380 aaKnown RBP14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Smtnl1Q99LM3 459 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ssr1Q9CY50 286 aaKnown RBP14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Tfip11Q9ERA6 838 aaKnown RBP14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Nap1l2P51860 460 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Urb2E9Q7L1 1524 aaKnown RBP14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Erich4Q3UNU4 136 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Jade2Q6ZQF7 829 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 LarsQ8BMJ2 1178 aa14.51□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Brf1Q8CFK2 676 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Duox2A2AQ99 1517 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Hvcn1Q3U2S8 269 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Frmd3Q8BHD4 595 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Arap1Q4LDD4 1452 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ccdc191J3QQ27 883 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ggnbp2Q5SV77 696 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 TmpoQ61033 693 aaKnown RBP14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Tiam1Q60610 1591 aa14.5□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Tsg101Q61187 391 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Themis2Q91YX0 663 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 ZwintQ9CQU5 252 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 PrxO55103 1391 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ppp1r15aP17564 657 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Fam43aQ8BUP8 424 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Gm21680A0A0G2JGR8 267 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Dnajc2P54103 621 aaKnown RBP14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Rnf187Q8BFX1 236 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Gjb2Q00977 226 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Fkbp5Q64378 456 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Dydc1Q9D9T0 175 aa14.49□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Fgd6Q69ZL1 1399 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Evi5lH3BKQ3 813 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ell2Q3UKU1 639 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ccdc150Q8CDI7 1110 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Eif3bQ8JZQ9 803 aaKnown RBP14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Golim4Q8BXA1 655 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 IncenpQ9WU62 880 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Galntl5Q9D4M9 431 aa14.48□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Hmgb2P30681 210 aaKnown RBP14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Kcnj4P52189 445 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ankrd1Q9CR42 319 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Cfap53Q9D439 514 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Knop1Q9Z2Q2 478 aaKnown RBP14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Vps37dQ810I0 261 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Ncapg2Q6DFV1 1138 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Arhgef18Q6P9R4 1021 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Tacc1Q6Y685 774 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Cep55Q8BT07 462 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Smc5Q8CG46 1101 aaKnown RBP14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Erlin1Q91X78 346 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Zeb2Q9R0G7 1215 aa14.47□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.46□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Pdia4P08003 638 aaKnown RBP14.46□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Map3k13Q1HKZ5 959 aa14.46□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Rcan3Q9JKK0 239 aa14.46□□□□□ -0.09
Ssh1-202ENSMUST00000112298 Gm18336A0A140LIU8 765 aa14.46□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Fbf1A2A870 1173 aa14.46□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Trim25Q61510 634 aaKnown RBP14.46□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Pdcl2Q78Y63 240 aa14.46□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Gas2l3Q3UWW6 683 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Jakmip3Q5DTN8 844 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Olr1Q9EQ09 363 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Rad23bP54728 416 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Slc26a8Q8R0C3 999 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Kcnh5Q920E3 988 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Ddx58Q6Q899 926 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Maats1Q8BRC6 783 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Tmc2Q8R4P4 888 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Map2k1P31938 393 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Pof1bQ8K4L4 587 aa14.45□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Mcm4P49717 862 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Strn4P58404 760 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Pip4k2bQ80XI4 416 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Hspa4Q61316 841 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Nlrp3Q8R4B8 1033 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Pde4bB1AWC9 736 aa14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Rbm27Q5SFM8 1060 aaKnown RBP14.44□□□□□ -0.1
Ssh1-202ENSMUST00000112298 Limch1Q3UH68 1057 aa14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms