RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Cd109Q8R422 1442 aa17.74■□□□□ 0.43
Casc4-201ENSMUST00000078752 Ddx27Q921N6 760 aaKnown RBP17.74■□□□□ 0.43
Casc4-201ENSMUST00000078752 Sall3Q62255 1320 aa17.73■□□□□ 0.43
Casc4-201ENSMUST00000078752 Btn2a2A4QPC6 514 aa17.73■□□□□ 0.43
Casc4-201ENSMUST00000078752 Ctr9Q62018 1173 aaKnown RBP17.73■□□□□ 0.43
Casc4-201ENSMUST00000078752 Lamb3Q61087 1168 aa17.73■□□□□ 0.43
Casc4-201ENSMUST00000078752 Secisbp2lQ6A098 1086 aaKnown RBP17.73■□□□□ 0.43
Casc4-201ENSMUST00000078752 Zkscan2G3X952 960 aa17.72■□□□□ 0.43
Casc4-201ENSMUST00000078752 MlecQ6ZQI3 291 aaKnown RBP17.72■□□□□ 0.43
Casc4-201ENSMUST00000078752 Pik3c2gO70167 1506 aa17.72■□□□□ 0.43
Casc4-201ENSMUST00000078752 Mcm2P97310 904 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Gtf2f1Q3THK3 508 aaKnown RBP17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 L1td1Q587J6 782 aaKnown RBP17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Dmrt2Q8BG36 561 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Gcc1Q9D4H2 778 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Golga5Q9QYE6 729 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 ErbinQ80TH2 1402 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Gm9992B2RWK3 458 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Gcom1E9PZ54 550 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 MyzapQ3UIJ9 466 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Ccdc66Q6NS45 935 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Unc93aQ710D3 458 aa17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Wdr33Q8K4P0 1330 aaKnown RBP17.71■□□□□ 0.43
Casc4-201ENSMUST00000078752 Ube2hP62257 183 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Rec8Q8C5S7 591 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Gm3409A0A0G2JE67 319 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Ccar2Q8VDP4 922 aaKnown RBP17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Chmp3Q9CQ10 224 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Q9D9S1 216 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Tceal9Q9DD24 104 aa17.7■□□□□ 0.42
Casc4-201ENSMUST00000078752 Gprasp1Q5U4C1 1347 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 CalcaP70160 136 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Dnaaf4Q8R368 420 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Ccdc181Q80ZU5 509 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Q8C5K5 320 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Stk31Q99MW1 1018 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Dnajc5bQ9CQ94 199 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Krt85Q9Z2T6 507 aa17.69■□□□□ 0.42
Casc4-201ENSMUST00000078752 Jakmip3Q5DTN8 844 aa17.68■□□□□ 0.42
Casc4-201ENSMUST00000078752 MycbpQ9EQS3 103 aa17.68■□□□□ 0.42
Casc4-201ENSMUST00000078752 Ppp1r3fQ9JIG4 799 aa17.68■□□□□ 0.42
Casc4-201ENSMUST00000078752 Plb1Q3TTY0 1478 aa17.68■□□□□ 0.42
Casc4-201ENSMUST00000078752 Dhx8A2A4P0 1244 aaKnown RBP17.68■□□□□ 0.42
Casc4-201ENSMUST00000078752 Zfp597E9Q6S0 419 aa17.67■□□□□ 0.42
Casc4-201ENSMUST00000078752 MycnP03966 462 aaKnown RBP17.67■□□□□ 0.42
Casc4-201ENSMUST00000078752 Lonp2Q9DBN5 852 aa17.66■□□□□ 0.42
Casc4-201ENSMUST00000078752 Stx6Q9JKK1 255 aa17.66■□□□□ 0.42
Casc4-201ENSMUST00000078752 Cfap157Q0VFX2 523 aa17.66■□□□□ 0.42
Casc4-201ENSMUST00000078752 Crocc2F6XLV1 1638 aa17.66■□□□□ 0.42
Casc4-201ENSMUST00000078752 Vps37cQ8R105 352 aa17.66■□□□□ 0.42
Casc4-201ENSMUST00000078752 Elf2Q9JHC9 593 aa17.65■□□□□ 0.42
Casc4-201ENSMUST00000078752 Nol10Q5RJG1 687 aaKnown RBP17.65■□□□□ 0.42
Casc4-201ENSMUST00000078752 Cnpy2Q9QXT0 182 aa17.65■□□□□ 0.42
Casc4-201ENSMUST00000078752 NexmifQ5DTT1 1515 aa17.65■□□□□ 0.42
Casc4-201ENSMUST00000078752 Hspa4Q61316 841 aa17.64■□□□□ 0.42
Casc4-201ENSMUST00000078752 1700017N19RikA0A087WPJ1 469 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Jakmip2D3YXK0 820 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Swt1Q9DBQ9 907 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Zcchc17Q9ESX4 241 aaKnown RBP17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Mug2P28666 1451 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Wwc1Q5SXA9 1104 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ankrd24Q80VM7 985 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Pnma3Q8JZW8 466 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ccdc96Q9CR92 584 aa17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Synpo2Q91YE8 1087 aaKnown RBP17.64■□□□□ 0.41
Casc4-201ENSMUST00000078752 Camsap1A2AHC3 1581 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Uspl1Q3ULM6 1089 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Cep112Q5PR68 954 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gm21190A0A0G2JGJ6 266 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gng11P61953 73 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gjb2Q00977 226 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Pde3bQ61409 1100 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Prdm4Q80V63 803 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Kdm4cQ8VCD7 1054 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ccdc171E9Q1U1 1324 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Bin1O08539 588 aaKnown RBP17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Tyro3P55144 880 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Frat2Q8K025 231 aa17.63■□□□□ 0.41
Casc4-201ENSMUST00000078752 Tex13c2A0A0G2JGA3 530 aa17.62■□□□□ 0.41
Casc4-201ENSMUST00000078752 Capn2O08529 700 aa17.62■□□□□ 0.41
Casc4-201ENSMUST00000078752 Hs1bp3Q3TC93 395 aa17.62■□□□□ 0.41
Casc4-201ENSMUST00000078752 Zswim4Q8C7B8 1101 aa17.62■□□□□ 0.41
Casc4-201ENSMUST00000078752 Lig3P97386 1015 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Smarcc1P97496 1104 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Fam76aQ922G2 307 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 FanclQ9CR14 375 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 AatfQ9JKX4 526 aaKnown RBP17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Bcar3Q9QZK2 820 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Setd1bQ8CFT2 1985 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Naip6Q9JIB6 1403 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Polr3aB2RXC6 1390 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Actn3O88990 900 aaKnown RBP17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ppfia3P60469 1194 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ktn1Q61595 1327 aaKnown RBP17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gm45015A0A140LII9 184 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gm18336A0A140LIU8 765 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Fam107bQ3TGF2 131 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Q3UPC7 1272 aa17.61■□□□□ 0.41
Casc4-201ENSMUST00000078752 Asxl1P59598 1514 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Cavin4A2AMM0 362 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms