RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm10471E9Q1C7 252 aa17.14■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Srgap3Q812A2 1099 aa17.14■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Ap3b2Q9JME5 1082 aa17.14■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Jph4Q80WT0 628 aa17.14■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Pde4cQ3UEI1 686 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Tmx3Q8BXZ1 456 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Rprd2Q6NXI6 1469 aaKnown RBP17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Usp25P57080 1055 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Polr3aB2RXC6 1390 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Wdr63B2RY71 923 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Stim1P70302 685 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Nom1Q3UFM5 854 aaKnown RBP17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Rassf4Q8CB96 322 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Tbc1d8Q9Z1A9 1134 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Gjb2Q00977 226 aa17.13■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 KdrP35918 1367 aa17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Ercc6lQ8BHK9 1240 aa17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Elp1Q7TT37 1333 aaKnown RBP17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Il4rP16382 810 aa17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Mroh2bQ7M6Y6 1581 aa17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Ccdc39Q9D5Y1 937 aa17.12■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 DonsonQ9QXP4 560 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 CrcpO35427 148 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Stx6Q9JKK1 255 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Gm7298A0A0N4SVU1 1476 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Bbof1Q3V079 533 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Cfap73J3QPZ5 306 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Cdkl5Q3UTQ8 938 aa17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Mphosph10Q810V0 681 aaKnown RBP17.11■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Bms1Q6PGF5 1284 aaKnown RBP17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Iqca1Q9CUL5 857 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Smarcc1P97496 1104 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Chd1lQ9CXF7 900 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 LlphQ9D945 130 aaKnown RBP17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 IncenpQ9WU62 880 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Mindy4Q3UQI9 744 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Znf526Q8BI66 675 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Pof1bQ8K4L4 587 aa17.1■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Cwc27Q3TKY6 469 aa17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Larp1Q6ZQ58 1072 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Tubb4bP68372 445 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Slc13a4Q8BZ82 625 aa17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 CebpzP53569 1052 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Ccdc93Q7TQK5 629 aa17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Plcd3Q8K2J0 785 aa17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 ZwintQ9CQU5 252 aa17.09■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Adck5Q80V03 582 aa17.08■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Rufy2Q8R4C2 606 aa17.08■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Nf2P46662 596 aa17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ccp110Q7TSH4 1004 aa17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Acbd3Q8BMP6 525 aa17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Cct4P80315 539 aaKnown RBP17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Mrps27Q8BK72 415 aaKnown RBP17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Luzp1Q8R4U7 1068 aaKnown RBP17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 AqrQ8CFQ3 1481 aaKnown RBP17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Fsd1Q7TPM6 496 aa17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Vps18Q8R307 973 aa17.08■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 TnikP83510 1323 aa17.07■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Stxbp4Q9WV89 557 aa17.07■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Zeb2Q9R0G7 1215 aa17.07■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Zfp397Q7TNK4 527 aa17.07■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Vps53Q8CCB4 832 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 PdiltQ9DAN1 588 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Lmbr1Q9JIT0 490 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Duxf3A0A0N4SV92 674 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 ClasrpQ8CFC7 668 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Calcoco1Q8CGU1 691 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Pik3c2gO70167 1506 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Lrrcc1Q69ZB0 1026 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Fam76aQ922G2 307 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ccdc121E9Q6D3 323 aa17.06■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ccdc162pQ0VG85 912 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Cdca8Q8BHX3 289 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ms4a1P19437 291 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Hdgfl1Q2VPR5 283 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 A2mQ6GQT1 1474 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ano10Q8BH79 659 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Gm7361D3Z6R1 267 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Jade2Q6ZQF7 829 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Tmc2Q8R4P4 888 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Pcf11G3X9Z4 1553 aa17.05■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 EvcP57680 1005 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Secisbp2lQ6A098 1086 aaKnown RBP17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ddx58Q6Q899 926 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Noc3lQ8VI84 807 aaKnown RBP17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 IbtkQ6ZPR6 1352 aaKnown RBP17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Chmp7Q8R1T1 451 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Atf7ipQ7TT18 1306 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Rsph10bE9PYQ0 876 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Mcm6P97311 821 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Als2cr12Q8BVM7 383 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Ccdc158Q8CDI6 1109 aa17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Brd3Q8K2F0 726 aaKnown RBP17.04■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Rbm28Q8CGC6 750 aaKnown RBP17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Bloc1s4Q8VED2 215 aa17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Grin2bQ01097 1482 aa17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Zkscan5Q9Z1D8 819 aa17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 TxlnaQ6PAM1 554 aaKnown RBP17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Wasf1Q8R5H6 559 aa17.03■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Anp32cQ64G17 123 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms