RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Rrs1Q9CYH6 365 aaKnown RBP11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Mapk8ip1Q9WVI9 707 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Rnf187Q8BFX1 236 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gps2Q921N8 327 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Cfap45Q9D9U9 551 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Map9Q3TRR0 646 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Trim34aQ99PP6 485 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Flad1Q8R123 492 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ccdc39Q9D5Y1 937 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ppp1r42Q8R1Z4 357 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Wdr33Q8K4P0 1330 aaKnown RBP11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 NcapgE9PWG6 1004 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Pafah1b1P63005 410 aaKnown RBP11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Cbx1P83917 185 aaKnown RBP11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Fkbp5Q64378 456 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ankib1Q6ZPS6 1085 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 MicalclQ9D5U9 680 aa11.53□□□□□ -0.56
Syne1-201ENSMUST00000041639 Mroh2bQ7M6Y6 1581 aa11.52□□□□□ -0.56
Syne1-201ENSMUST00000041639 AcrbpQ3V140 540 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Wwc1Q5SXA9 1104 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 ZwintQ9CQU5 252 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Cct4P80315 539 aaKnown RBP11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Map4k4P97820 1233 aaKnown RBP11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Adck5Q80V03 582 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Lmbr1Q9JIT0 490 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Fam50bQ9WTJ8 334 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 TnikP83510 1323 aa11.52□□□□□ -0.57
Syne1-201ENSMUST00000041639 Rcan3Q9JKK0 239 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ccdc141E9Q8Q6 1531 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Trim55G3X8Y1 545 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 AidaQ8C4Q6 305 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 ImmtQ8CAQ8 757 aaKnown RBP11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Dnaaf4Q8R368 420 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Cfap69Q8BH53 942 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tnni2P13412 182 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Golim4Q8BXA1 655 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Hoxa7P02830 229 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Galntl5Q9D4M9 431 aa11.51□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ltv1Q6NSQ7 470 aaKnown RBP11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Fam163aQ8CAA5 168 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 ImpactO55091 318 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Q4VA45 678 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Gbp4Q61107 620 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ercc6lQ8BHK9 1240 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Mipol1Q9D9F8 279 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Jakmip2D3YXK0 820 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Sall3Q62255 1320 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Bcar3Q9QZK2 820 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 4930572O03RikQ8C5Y0 211 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Map3k1P53349 1493 aa11.5□□□□□ -0.57
Syne1-201ENSMUST00000041639 Sos1Q62245 1319 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Plekhd1B2RPU2 505 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Aplp1Q03157 653 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Nup133Q8R0G9 1155 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Nol7Q9D7Z3 254 aaKnown RBP11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Rapgef4Q9EQZ6 1011 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 CalrP14211 416 aaKnown RBP11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 GpkowQ56A08 488 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Lrrc45Q8CIM1 670 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 PtprkP35822 1457 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Wasf1Q8R5H6 559 aa11.49□□□□□ -0.57
Syne1-201ENSMUST00000041639 Grin2bQ01097 1482 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ces1hD3Z298 562 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Q3UPC7 1272 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ppp1r9bQ6R891 817 aaKnown RBP11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ppm1eQ80TL0 749 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Cep55Q8BT07 462 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Asxl1P59598 1514 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tbc1d9Q3UYK3 1264 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Slc52a2Q9D8F3 450 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Znf131Q8K3J5 619 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Hvcn1Q3U2S8 269 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 Stxbp4Q9WV89 557 aa11.48□□□□□ -0.57
Syne1-201ENSMUST00000041639 EvcP57680 1005 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tbc1d7Q9D0K0 293 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Uri1Q3TLD5 531 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 TxlnbQ8VBT1 685 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Cavin1O54724 392 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Pde1cQ64338 706 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ccdc66Q6NS45 935 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Pde4bB1AWC9 736 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Rasa1E9PYG6 1038 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Cct2P80314 535 aaKnown RBP11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tmem67Q8BR76 992 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ppp1r15aP17564 657 aa11.47□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tspyl3Q3UYP3 334 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 ApobrQ8VBT6 942 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 NinlQ6ZQ12 1394 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 NgdnQ9DB96 315 aaKnown RBP11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Ddx58Q6Q899 926 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Bicdl1A0JNT9 577 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Zbtb21E9Q444 1094 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Bag4Q8CI61 457 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Tmc2Q8R4P4 888 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Polr3dQ91WD1 398 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 Lrrfip2Q91WK0 415 aa11.46□□□□□ -0.57
Syne1-201ENSMUST00000041639 VeztQ3ZK22 780 aa11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 EappQ5BU09 281 aa11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Luzp1Q8R4U7 1068 aaKnown RBP11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Trim11Q99PQ2 467 aa11.46□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms