RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gcc1Q9D4H2 778 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Jakmip3Q5DTN8 844 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Tshz2Q68FE9 1030 aa19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Hap1O35668 628 aa19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 PhaxQ9JJT9 385 aaKnown RBP19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 DroshaQ5HZJ0 1373 aaKnown RBP19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Cfap99A0A140LIX9 648 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Fam107bQ3TGF2 131 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Samd9lQ69Z37 1561 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 TnnQ80Z71 1560 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Cep135Q6P5D4 1140 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Ankrd24Q80VM7 985 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 LarsQ8BMJ2 1178 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Bag4Q8CI61 457 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 SelenooQ9DBC0 667 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 MvpQ9EQK5 861 aa19.64■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Eif3aP23116 1344 aaKnown RBP19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gzf1Q4VBD9 706 aa19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Rbm27Q5SFM8 1060 aaKnown RBP19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Sh3bp1P55194 680 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 BcanQ61361 883 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 CarsQ9ER72 831 aaKnown RBP19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atp7aQ64430 1491 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Pde1cQ64338 706 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cwc27Q3TKY6 469 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 DonsonQ9QXP4 560 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gnl2Q99LH1 728 aaKnown RBP19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Krt82Q99M74 516 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Il4rP16382 810 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Camsap2Q8C1B1 1461 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Trerf1Q8BXJ2 1205 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 AI481877A2ALV5 1481 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Zranb3Q6NZP1 1069 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Krt85Q9Z2T6 507 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atp10dQ8K2X1 1416 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Secisbp2lQ6A098 1086 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Mmel1Q9JLI3 765 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Kank1E9Q238 1360 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Paip2Q9D6V8 124 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 WizO88286 1684 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Ranbp1P34022 203 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Eif5P59325 429 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Hspa4Q61316 841 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Srgap3Q812A2 1099 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gm18336A0A140LIU8 765 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Zeb2Q9R0G7 1215 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Psma5Q9Z2U1 241 aaKnown RBP19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Mcm3P25206 812 aaKnown RBP19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 PxdnQ3UQ28 1475 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cnnm1Q0GA42 951 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atf3Q60765 181 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 TmpoQ61033 693 aaKnown RBP19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Fancd2Q80V62 1450 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Wdr33Q8K4P0 1330 aaKnown RBP19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Rasa1E9PYG6 1038 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Ccdc73Q8CDM4 1066 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cpa2Q504N0 417 aa19.58■□□□□ 0.73
Col17a1-201ENSMUST00000026045 SarnpQ9D1J3 210 aaKnown RBP19.58■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Bbof1Q3V079 533 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Nbr1P97432 988 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Acbd3Q8BMP6 525 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Jakmip1Q8BVL9 626 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 RalgapbQ8BQZ4 1484 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zkscan7E9PVW1 718 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Q9D9S1 216 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Rapgef6Q5NCJ1 1609 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Pla2r1Q62028 1487 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Aldh1l1Q8R0Y6 902 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Tmc1Q8R4P5 757 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 U2af2P26369 475 aaKnown RBP19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Mcm6P97311 821 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Als2cr12Q8BVM7 383 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Snw1Q9CSN1 536 aaKnown RBP19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zpr1Q62384 459 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ssr1Q9CY50 286 aaKnown RBP19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Hdgfl1Q2VPR5 283 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Stk38Q91VJ4 465 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Evi5lH3BKQ3 813 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Smarcc1P97496 1104 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ppip5k2Q6ZQB6 1129 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Vps18Q8R307 973 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 TefQ9JLC6 301 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 CebpzP53569 1052 aaKnown RBP19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Dnajc5bQ9CQ94 199 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 PsapQ61207 557 aaKnown RBP19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ccdc186Q8C9S4 917 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Erlin2Q8BFZ9 340 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Slc12a5Q91V14 1138 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ppp1r15aP17564 657 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Plekhm2Q80TQ5 1018 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zmym4A2A791 1549 aaKnown RBP19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Exoc6bA6H5Z3 810 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Pip4k2bQ80XI4 416 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 IncenpQ9WU62 880 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 CrcpO35427 148 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Map3k13Q1HKZ5 959 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Synpo2Q91YE8 1087 aaKnown RBP19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Sirt1Q923E4 737 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Nkx1-2P42580 305 aa19.53■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Trappc8E9PWG2 1437 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms