RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ginm1Q91WR6 327 aa19.19■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Pdzd9Q9D9M4 266 aa19.19■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Phkg2Q9DB30 406 aa19.19■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Abcc12Q80WJ6 1366 aa19.18■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Tnrc6cQ3UHC0 1690 aaKnown RBP19.18■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Akap11E9Q777 1895 aa19.17■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Ankrd23Q812A3 306 aa19.17■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Ssfa2Q922B9 1252 aa19.17■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Sos1Q62245 1319 aa19.17■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Ttc21aQ8C0S4 1314 aa19.17■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Gas2l2Q5SSG4 860 aa19.16■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Sik1Q60670 779 aa19.16■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Eif3bQ8JZQ9 803 aaKnown RBP19.16■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Cacna1sQ02789 1880 aa19.16■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Gnai1B2RSH2 354 aa19.15■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Speer4bQ9D9F7 267 aa19.15■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Gnai3Q9DC51 354 aa19.15■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Ankrd50F7BE84 1390 aa19.14■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Gm21680A0A0G2JGR8 267 aa19.14■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Nkx2-3P97334 362 aa19.14■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Kat6bQ8BRB7 1872 aa19.13■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Larp1Q6ZQ58 1072 aaKnown RBP19.13■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Dmrt2Q8BG36 561 aa19.13■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Sgsm1Q8BPQ7 1093 aa19.13■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Exoc5Q3TPX4 708 aa19.12■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Asic4Q7TNS7 539 aa19.12■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Cdc37l1Q9CZP7 335 aa19.12■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Mast2Q60592 1734 aa19.12■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Ltbp1Q8CG19 1712 aa19.12■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Ttc41Q692V3 1318 aa19.11■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Elp1Q7TT37 1333 aaKnown RBP19.11■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Prim1P20664 417 aa19.11■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Rbm25B2RY56 838 aaKnown RBP19.1■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Ksr2Q3UVC0 959 aa19.1■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Ggnbp2Q5SV77 696 aa19.1■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Chmp7Q8R1T1 451 aa19.1■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Kank1E9Q238 1360 aa19.1■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Myo5bP21271 1818 aa19.08■□□□□ 0.65
Ercc1-201ENSMUST00000003645 NudcO35685 332 aaKnown RBP19.08■□□□□ 0.65
Ercc1-201ENSMUST00000003645 L3mbtl2P59178 703 aa19.08■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Foxp4Q9DBY0 795 aaKnown RBP19.08■□□□□ 0.65
Ercc1-201ENSMUST00000003645 Gm21663A0A0G2JE01 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Gm7361D3Z6R1 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 5031410I06RikE9Q4E0 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Gm1979E9QAN3 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Gm5862K7N5V5 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Gm10220K7N660 267 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 CastP51125 788 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Ddb1Q3U1J4 1140 aaKnown RBP19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Nwd2Q6P5U7 1742 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Slc5a1Q8C3K6 665 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Klhdc4Q921I2 584 aa19.07■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Ccar1Q8CH18 1146 aaKnown RBP19.06■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Plekhh1Q80TI1 1356 aa19.06■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Erbb3Q61526 1339 aa19.06■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Usp16Q99LG0 825 aa19.06■□□□□ 0.64
Ercc1-201ENSMUST00000003645 4930523C07RikE9Q2T4 99 aa19.05■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Igsf1Q7TQA1 1317 aa19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 PappaQ8R4K8 1624 aa19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Fbln2P37889 1221 aa19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Eif5bQ05D44 1216 aaKnown RBP19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Ccdc155Q80VJ8 648 aa19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Ints5Q8CHT3 1018 aa19.04■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Btbd11Q6GQW0 1109 aa19.03■□□□□ 0.64
Ercc1-201ENSMUST00000003645 U2surpQ6NV83 1029 aaKnown RBP19.03■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Ubr2Q6WKZ8 1755 aa19.02■□□□□ 0.64
Ercc1-201ENSMUST00000003645 Upf2A2AT37 1269 aaKnown RBP19.01■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Vamp4O70480 141 aa19.01■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Senp3Q9EP97 568 aaKnown RBP19■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Crb1Q8VHS2 1405 aa19■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Eif4a1P60843 406 aaKnown RBP18.99■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Cyp2d12Q8BVD2 504 aa18.99■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Taok3Q8BYC6 898 aa18.99■□□□□ 0.63
Ercc1-201ENSMUST00000003645 ApobrQ8VBT6 942 aa18.98■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Ccdc171E9Q1U1 1324 aa18.98■□□□□ 0.63
Ercc1-201ENSMUST00000003645 GakQ99KY4 1305 aa18.98■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Msh6P54276 1358 aaKnown RBP18.98■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Atf5O70191 283 aa18.97■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Ccnl1Q52KE7 532 aaKnown RBP18.97■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Col1a2Q01149 1372 aa18.97■□□□□ 0.63
Ercc1-201ENSMUST00000003645 Pibf1E9Q6K3 756 aa18.95■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Trim26Q99PN3 545 aa18.95■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Tjp1P39447 1745 aaKnown RBP18.94■□□□□ 0.62
Ercc1-201ENSMUST00000003645 1700019A02RikA0A087WPV9 146 aa18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Ccdc60Q8C4J0 545 aa18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 KarsQ99MN1 595 aaKnown RBP18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Chpf2Q3UU43 768 aa18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Rwdd1Q9CQK7 243 aa18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Zcrb1Q9CZ96 217 aaKnown RBP18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Hdac6Q9Z2V5 1149 aa18.93■□□□□ 0.62
Ercc1-201ENSMUST00000003645 AceP09470 1312 aa18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Iqsec3Q3TES0 1195 aa18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Q3TQI7 289 aaKnown RBP18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Ppp6r1Q7TSI3 856 aa18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Efcab2Q9CQ46 164 aa18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Rps6ka4Q9Z2B9 773 aa18.92■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Gm6268A2A3U9 297 aa18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Chl1P70232 1209 aa18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 G3bp1P97855 465 aaKnown RBP18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Cavin2Q63918 418 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms