RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CPA5Q8WXQ8 436 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RFFLQ8WZ73 363 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TP53INP1Q96A56 240 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ACSF2Q96CM8 615 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 DUS3LQ96G46 650 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ELMO2Q96JJ3 720 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RAD9AQ99638 391 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 DUSP26Q9BV47 211 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 B3GNT5Q9BYG0 378 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SLC19A3Q9BZV2 496 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 OR2B2Q9GZK3 357 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 HSD3B7Q9H2F3 369 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ST6GALNAC4Q9H4F1 302 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ECT2Q9H8V3 914 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 EMC7Q9NPA0 242 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SNX15Q9NRS6 342 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 THEGQ9P2T0 379 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CACNG4Q9UBN1 327 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 IL20RAQ9UHF4 553 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 BCAP29Q9UHQ4 241 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 BCS1LQ9Y276 419 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PCDHB14Q9Y5E9 798 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PCDHA10Q9Y5I2 948 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CSNK1G3Q9Y6M4 447 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 WASF2Q9Y6W5 498 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 MAP3K15Q6ZN16 1313 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TCAPO15273 167 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SGCEO43556 437 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 DENRO43583 198 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 VEGFDO43915 354 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 LGI1O95970 557 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PGK1P00558 417 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 GJB1P08034 283 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CCDC130P13994 396 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 NDUFB7P17568 137 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RAB3AP20336 220 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 NR1D1P20393 614 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CHMP24386 653 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 AKT1P31749 480 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 GPX4P36969 197 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SLC19A1P41440 591 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SLC1A4P43007 532 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 MCAMP43121 646 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ANXA11P50995 505 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 MECP2P51608 486 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 HERVK_113P62684 666 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ERVK-24P63145 666 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TNFRSF17Q02223 184 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 GAD2Q05329 585 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TYRO3Q06418 890 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PUDPQ08623 228 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TUBB2AQ13885 445 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 GPR176Q14439 515 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 DGKDQ16760 1214 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TSTQ16762 297 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 KIZQ2M2Z5 673 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TRIM16LQ309B1 348 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ZMAT1Q5H9K5 638 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 NT5DC1Q5TFE4 455 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 IZUMO3Q5VZ72 239 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TUSC5Q8IXB3 177 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RCOR2Q8IZ40 523 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CLYBLQ8N0X4 340 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 C19orf47Q8N9M1 422 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SETD9Q8NE22 299 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 FAM13CQ8NE31 585 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 WFIKKN2Q8TEU8 576 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PIK3R3Q92569 461 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CD101Q93033 1021 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ELMO3Q96BJ8 720 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PLEKHA8Q96JA3 519 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 FOPNLQ96NB1 174 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 BIRC8Q96P09 236 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RAB3IPQ96QF0 476 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 XPO6Q96QU8 1125 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 INSM2Q96T92 566 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SMOQ99835 787 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TRAF4Q9BUZ4 470 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 TUBB2BQ9BVA1 445 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 SLC2A11Q9BYW1 496 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 MFFQ9GZY8 342 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ALX4Q9H161 411 aaPredicted RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 COQ10BQ9H8M1 238 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 MAGEF1Q9HAY2 307 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RAB20Q9NX57 234 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CLEC5AQ9NY25 188 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 IMPACTQ9P2X3 320 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 GNPTGQ9UJJ9 305 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 ANAPC2Q9UJX6 822 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 CDH9Q9ULB4 789 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 RUVBL2Q9Y230 463 aaKnown RBP4.94□□□□□ -1.62
EPHA3-202ENST00000452448 STARD10Q9Y365 291 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 USP6P35125 1406 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 NRXN3Q9Y4C0 1643 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 DLG5Q8TDM6 1919 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 FLT4P35916 1363 aa4.94□□□□□ -1.62
EPHA3-202ENST00000452448 PTPRUQ92729 1446 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 NPHP3-ACAD11A0A0J9YXS1 232 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 NKRFO15226 690 aaKnown RBP eCLIP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 LPXNO60711 386 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms