RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PNPLA6Q8IY17 1366 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CPS1P31327 1500 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 LMO7Q8WWI1 1683 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 MAP3K15Q6ZN16 1313 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 MYH2Q9UKX2 1941 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM272A0A1B0GTI8 110 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 A0A1W2PQF6 199 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 MYO1GB0I1T2 1018 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 IFNL4K9M1U5 179 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PDLIM1O00151 329 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CHL1O00533 1208 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 KLK8O60259 260 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 MTA2O94776 668 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRF1P14222 555 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PAX7P23759 505 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 UBASH3AP57075 661 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 NLRP5P59047 1200 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 GNGT1P63211 74 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRAMEP78395 509 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 SHBQ15464 509 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 ESCO2Q56NI9 601 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 DCAF6Q58WW2 860 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TTC19Q6DKK2 380 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM154Q6P9G4 183 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TRIM65Q6PJ69 517 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 BLOC1S2Q6QNY1 142 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PARM1Q6UWI2 310 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM43BQ6ZT52 329 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 RUFY3Q7L099 469 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 MRPL10Q7Z7H8 261 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 ANKRD23Q86SG2 305 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PATL1Q86TB9 770 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 VSTM4Q8IW00 320 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZCCHC9Q8N567 271 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 WDTC1Q8N5D0 677 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TRIM58Q8NG06 486 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 GABPB2Q8TAK5 448 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 DENND1AQ8TEH3 1009 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 LZICQ8WZA0 190 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 LPAR1Q92633 364 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 FBXL8Q96CD0 374 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC114Q96M63 670 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPAG5Q96R06 1193 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 LLPHQ9BRT6 129 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 NPFFR1Q9GZQ6 430 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 POLR1BQ9H9Y6 1135 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 KIF9Q9HAQ2 790 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZCCHC17Q9NP64 241 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 HYPKQ9NX55 129 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 PLK2Q9NYY3 685 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 TBC1D29Q9UFV1 150 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 HPCAL4Q9UM19 191 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADAM18Q9Y3Q7 739 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 LSM4Q9Y4Z0 139 aaKnown RBP4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 DIP2AQ14689 1571 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 RGPD1P0DJD0 1748 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 CEMIPQ8WUJ3 1361 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 C3P01024 1663 aa4.51□□□□□ -1.69
HMGB1P16-201ENST00000447155 COL22A1Q8NFW1 1626 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ERICH2A1L162 156 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 DYTNA2CJ06 578 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CFAP73A6NFT4 308 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 PTGES3LE9PB15 166 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 VILLO15195 856 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 PFKFB2O60825 505 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 FLOT1O75955 427 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 EPB41P11171 864 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 KRT10P13645 584 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ETFAP13804 333 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 FERP16591 822 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ITGAXP20702 1163 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 AGAP20933 346 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 MYF6P23409 242 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 TBXAS1P24557 533 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SHMT1P34896 483 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 PEX19P40855 299 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SELENOVP59797 346 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ACTN3Q08043 901 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ITGADQ13349 1161 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 LAMB3Q13751 1172 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARHGEF6Q15052 776 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SOWAHAQ2M3V2 549 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 COL28A1Q2UY09 1125 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 LRRC23Q53EV4 343 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPECC1Q5M775 1068 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 WASHC2DQ5SRD0 308 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 EMBQ6PCB8 327 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CRELD2Q6UXH1 353 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CACNA2D4Q7Z3S7 1137 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPATA21Q7Z572 469 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 NOXA1Q86UR1 476 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SFTPA2Q8IWL1 248 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 LMNTD2Q8IXW0 634 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms