RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 PLEKHA1Q9HB21 404 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 PCDH18Q9HCL0 1135 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 ARHGEF28Q8N1W1 1705 aaKnown RBP11.02□□□□□ -0.64
KNOP1-201ENST00000219837 A0A075B6Q4 140 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 A0A0U1RQJ8 604 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 FAM155BO75949 473 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 LRIG2O94898 1065 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 GNSP15586 552 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TNFRSF8P28908 595 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 DSC2Q02487 901 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 MYBPC3Q14896 1274 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 NAIF1Q69YI7 327 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 UTS2BQ765I0 119 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ARCQ7LC44 396 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 AMIGO2Q86SJ2 522 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 HID1Q8IV36 788 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 CRELD1Q96HD1 420 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ANKRD27Q96NW4 1050 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 MTRRQ9UBK8 725 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PADI3Q9ULW8 664 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 SAMD4AQ9UPU9 718 aaKnown RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PCDHGA3Q9Y5H0 932 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 SNAP91O60641 907 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 CLDN9O95484 217 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 SLC7A2P52569 658 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 CERS5Q8N5B7 392 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 OR5T3Q8NGG3 340 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 OR2AJ1Q8NGZ0 328 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ACE2Q9BYF1 805 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 NMUR1Q9HB89 426 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PDP1Q9P0J1 537 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TPST2O60704 377 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 UROSP10746 265 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 MPSTP25325 297 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TIE1P35590 1138 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 RIPK1Q13546 671 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 REP15Q6BDI9 236 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TMPRSS11AQ6ZMR5 421 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 LCN9Q8WX39 176 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 COX4I2Q96KJ9 171 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TDRD1Q9BXT4 1180 aaKnown RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PDZD7Q9H5P4 517 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 GTF2IRD1Q9UHL9 959 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 U3KQV3 271 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 DHRS12A0PJE2 317 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 TSPAN1O60635 241 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PLIN3O60664 434 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ABHD2P08910 425 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 USP4Q13107 963 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 MEA1Q16626 185 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 LRRC73Q5JTD7 316 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 FUT10Q6P4F1 479 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 PRSS55Q6UWB4 352 aaPredicted RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 DHDDSQ86SQ9 333 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 LIX1Q8N485 282 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 POC5Q8NA72 575 aa11.02□□□□□ -0.65
KNOP1-201ENST00000219837 NOL11Q9H8H0 719 aaKnown RBP11.02□□□□□ -0.65
KNOP1-201ENST00000219837 CFIP05156 583 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 GNALP38405 381 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 P4HA3Q7Z4N8 544 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 LDB1Q86U70 411 aaPredicted RBP11.01□□□□□ -0.65
KNOP1-201ENST00000219837 SATL1Q86VE3 508 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
KNOP1-201ENST00000219837 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
KNOP1-201ENST00000219837 ACMSDQ8TDX5 336 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 MRPS30Q9NP92 439 aaKnown RBP11.01□□□□□ -0.65
KNOP1-201ENST00000219837 IFT46Q9NQC8 304 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 TRPS1Q9UHF7 1281 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 ING4Q9UNL4 249 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 TRAF6Q9Y4K3 522 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 BTNL10A8MVZ5 291 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 CHST10O43529 356 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 RSL1D1O76021 490 aaKnown RBP11.01□□□□□ -0.65
KNOP1-201ENST00000219837 IFNA6P05013 189 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 CAPGP40121 348 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 GAD2Q05329 585 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 PCDH1Q08174 1060 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 GPR107Q5VW38 600 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 ULK3Q6PHR2 472 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 KBTBD2Q8IY47 623 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 STYXQ8WUJ0 223 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 TWIST2Q8WVJ9 160 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 NUDT4Q9NZJ9 180 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 SERPINA1P01009 418 aa11.01□□□□□ -0.65
KNOP1-201ENST00000219837 INHAP05111 366 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms