RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CES2O00748 559 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 KMOO15229 486 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 NUDT21O43809 227 aaKnown RBP16.25■□□□□ 0.19
DNMT1-229ENST00000593049 USP12O75317 370 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 TCEA3O75764 348 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 PNLIPP16233 465 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ACTR1BP42025 376 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ACTR1AP61163 376 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 GTF2H3Q13889 308 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 SPARCL1Q14515 664 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ATP13A5Q4VNC0 1218 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 CERCAMQ5T4B2 595 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 SLC30A9Q6PML9 568 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 FAM151BQ6UXP7 276 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ADGRG6Q86SQ4 1221 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 SLC35F6Q8N357 371 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 RASGEF1CQ8N431 466 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 OR4K2Q8NGD2 314 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 GDAP1Q8TB36 358 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 PTCD2Q8WV60 388 aaKnown RBP16.25■□□□□ 0.19
DNMT1-229ENST00000593049 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 TTC25Q96NG3 672 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 DEPDC7Q96QD5 511 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 OR2AG1Q9H205 316 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ETNK1Q9HBU6 452 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 SMOXQ9NWM0 555 aa16.25■□□□□ 0.19
DNMT1-229ENST00000593049 ZFC3H1O60293 1989 aaKnown RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CEP295Q9C0D2 2601 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 PLXNB3Q9ULL4 1909 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CHUKO15111 745 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 NOBOXO60393 691 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CDK14O94921 469 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 MT-CO3P00414 261 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 SLC2A4P14672 509 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 ZNF8P17098 575 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 AK4P27144 223 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CLCNKAP51800 687 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CDH17Q12864 832 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 MSLNQ13421 630 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 OLIG2Q13516 323 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 SEMA5AQ13591 1074 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 HLTFQ14527 1009 aaKnown RBP eCLIP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CHRNA6Q15825 494 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CDCP2Q5VXM1 449 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CHST15Q7LFX5 561 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 LRRTM4Q86VH4 590 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 DCBLD1Q8N8Z6 715 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 CCDC3Q9BQI4 270 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 RAB6BQ9NRW1 208 aa16.24■□□□□ 0.19
DNMT1-229ENST00000593049 SPATS2LQ9NUQ6 558 aaKnown RBP16.24■□□□□ 0.19
DNMT1-229ENST00000593049 ARHGEF17Q96PE2 2063 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 AP3B1O00203 1094 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 PGRMC1O00264 195 aaKnown RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 BUD23O43709 281 aaKnown RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 SUN1O94901 812 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 PRAMEF1O95521 474 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 PROS1P07225 676 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 ZNF140P52738 457 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 TMEM115Q12893 351 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 TARDBPQ13148 414 aaKnown RBP eCLIP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 BIRC2Q13490 618 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 PERM1Q5SV97 790 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 PPP1R21Q6ZMI0 780 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 C17orf82Q86X59 251 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 DNAAF3Q8N9W5 541 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 AVL9Q8NBF6 648 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 DDHD1Q8NEL9 900 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 ZNF398Q8TD17 642 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 STYXQ8WUJ0 223 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 CCDC74AQ96AQ1 378 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 ULK4Q96C45 1275 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 CNTNAP3BQ96NU0 1288 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 TIMM29Q9BSF4 260 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 TMEM121BQ9BXQ6 578 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-229ENST00000593049 CNTNAP3Q9BZ76 1288 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 ARFGAP3Q9NP61 516 aa16.23■□□□□ 0.19
DNMT1-229ENST00000593049 GOLGA6L10A0A0M3HER8 536 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 FAM149AA5PLN7 773 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 OR5K4A6NMS3 321 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 RHPN2P1A8MT19 583 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 LDB2O43679 373 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 KCNJ13O60928 360 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 SRP72O76094 671 aaKnown RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 ACP5P13686 325 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 TCP1P17987 556 aaKnown RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 VCLP18206 1134 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 RPL22P35268 128 aaKnown RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 SPIDRQ14159 915 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 TAB3Q8N5C8 712 aaPredicted RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 PRELID2Q8N945 189 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 ACTRT1Q8TDG2 376 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 HEXDCQ8WVB3 486 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 ZNF514Q96K75 400 aaPredicted RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 NRSN2Q9GZP1 204 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 EIF2B3Q9NR50 452 aaKnown RBP16.22■□□□□ 0.19
DNMT1-229ENST00000593049 LRIT1Q9P2V4 623 aa16.22■□□□□ 0.19
DNMT1-229ENST00000593049 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms