RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 RESP18Q5W5W9 173 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 FAM72DQ6L9T8 149 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 CERS6Q6ZMG9 384 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 MARK2Q7KZI7 788 aaKnown RBP6.78□□□□□ -1.32
MUC1-221ENST00000610359 PRSS42Q7Z5A4 293 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 TRIM74Q86UV6 250 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 FAM72BQ86X60 149 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 PRIMA1Q86XR5 153 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 DNAAF5Q86Y56 855 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 TGIF2LYQ8IUE0 185 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 PASD1Q8IV76 773 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 ENDOVQ8N8Q3 282 aaKnown RBP6.78□□□□□ -1.32
MUC1-221ENST00000610359 CASKIN2Q8WXE0 1202 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 MR1Q95460 341 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 SH3KBP1Q96B97 665 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 ECHDC3Q96DC8 303 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 ZNF641Q96N77 438 aaPredicted RBP6.78□□□□□ -1.32
MUC1-221ENST00000610359 TRAPPC9Q96Q05 1148 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 SLX1AQ9BQ83 275 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 EPB41L1Q9H4G0 881 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 DLL4Q9NR61 685 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.78□□□□□ -1.32
MUC1-221ENST00000610359 TMEM63CQ9P1W3 806 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 B4GALT6Q9UBX8 382 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 TCFL5Q9UL49 500 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 NOVA2Q9UNW9 492 aaKnown RBP6.78□□□□□ -1.32
MUC1-221ENST00000610359 MTMR6Q9Y217 621 aa6.78□□□□□ -1.32
MUC1-221ENST00000610359 SNPHO15079 494 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 CETN3O15182 167 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 GRID2O43424 1007 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 MED7O43513 233 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RAMP2O60895 175 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RASSF9O75901 435 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 CAPN1P07384 714 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 KRT5P13647 590 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 NELFEP18615 380 aaKnown RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 KLK2P20151 261 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 TNFAIP3P21580 790 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 TEAD1P28347 426 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 GNA15P30679 374 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 ETV3P41162 512 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RRADP55042 308 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 KCNK10P57789 538 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 PPP1CAP62136 330 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 UBE2IP63279 158 aaKnown RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 GCNT1Q02742 428 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 Q0VFX4 171 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 TUBB3Q13509 450 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 MYBPC3Q14896 1274 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 PTPRRQ15256 657 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RABEP1Q15276 862 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 HIF1AQ16665 826 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SLC25A52Q3SY17 297 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 PTPN20Q4JDL3 420 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 CACHD1Q5VU97 1274 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 DENND2CQ68D51 928 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RAET1GQ6H3X3 334 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RWDD4Q6NW29 188 aaKnown RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RFLNAQ6ZTI6 216 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 FAM92BQ6ZTR7 304 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 HSD11B1LQ7Z5J1 315 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SLC9B2Q86UD5 537 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SMYD4Q8IYR2 804 aaPredicted RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 ZADH2Q8N4Q0 377 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 C1orf131Q8NDD1 294 aaKnown RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 SPATA3Q8NHX4 192 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RSC1A1Q92681 617 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 DTD2Q96FN9 168 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SGSM3Q96HU1 749 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 FCRL4Q96PJ5 515 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 GTPBP4Q9BZE4 634 aaKnown RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 PDE7BQ9NP56 450 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 CPNE7Q9UBL6 633 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RARRES3Q9UL19 164 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 PCDHA7Q9UN72 937 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 SNX7Q9UNH6 387 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 RPH3AQ9Y2J0 694 aaPredicted RBP6.77□□□□□ -1.33
MUC1-221ENST00000610359 PRKAB1Q9Y478 270 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 PCDHGB6Q9Y5F9 930 aa6.77□□□□□ -1.33
MUC1-221ENST00000610359 MXRA5Q9NR99 2828 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 IGHV5-51A0A0C4DH38 117 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 A0A0U1RQS6 177 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GOLGA6CA6NDK9 693 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GOLGA6BA6NDN3 693 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 TRAFD1O14545 582 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 PMM2O15305 246 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 SLC16A3O15427 465 aaKnown RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 DNAJC6O75061 913 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 JRKO75564 520 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 UBXN7O94888 489 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms