RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SLC25A3Q00325 362 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 SATB1Q01826 763 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 BTKQ06187 659 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 KPNB1Q14974 876 aaKnown RBP25.71■■□□□ 1.71
COL13A1-214ENST00000522165 MYLK3Q32MK0 819 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 C22orf39Q6P5X5 142 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 RAB44Q7Z6P3 723 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-214ENST00000522165 SIDT2Q8NBJ9 832 aaKnown RBP25.71■■□□□ 1.71
COL13A1-214ENST00000522165 LEMD2Q8NC56 503 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 IRF7Q92985 503 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.71■■□□□ 1.71
COL13A1-214ENST00000522165 FAM161BQ96MY7 647 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 BBS2Q9BXC9 721 aa25.71■■□□□ 1.71
COL13A1-214ENST00000522165 NKX1-2Q9UD57 310 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-214ENST00000522165 C5orf67F2Z3F1 127 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 CLASP2O75122 1294 aaKnown RBP25.7■■□□□ 1.71
COL13A1-214ENST00000522165 CLDN7O95471 211 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 HNRNPA1P09651 372 aaKnown RBP eCLIP25.7■■□□□ 1.71
COL13A1-214ENST00000522165 NTHL1P78549 312 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 PFKFB4Q16877 469 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 PRSS36Q5K4E3 855 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 TMEM198Q66K66 360 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 FAM151BQ6UXP7 276 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 CERS6Q6ZMG9 384 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 ULK2Q8IYT8 1036 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 GIMAP7Q8NHV1 300 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 GRIN3AQ8TCU5 1115 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 CD200R1Q8TD46 325 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 WDR60Q8WVS4 1066 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 LENG8Q96PV6 779 aaPredicted RBP25.7■■□□□ 1.71
COL13A1-214ENST00000522165 LINC00597Q9H2U6 94 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 RNF112Q9ULX5 631 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 FIS1Q9Y3D6 152 aa25.7■■□□□ 1.71
COL13A1-214ENST00000522165 XYLBO75191 536 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 TSPAN12O95859 305 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 PIK3R1P27986 724 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 PPARGP37231 505 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-214ENST00000522165 ZNF77Q15935 545 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 KIRREL3Q8IZU9 778 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 TUBGCP5Q96RT8 1024 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 MEAF6Q9HAF1 191 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 SLC25A13Q9UJS0 675 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 G3BP2Q9UN86 482 aaKnown RBP25.7■■□□□ 1.7
COL13A1-214ENST00000522165 TRAF6Q9Y4K3 522 aa25.7■■□□□ 1.7
COL13A1-214ENST00000522165 SKAP2O75563 359 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-214ENST00000522165 ARHGEF15O94989 841 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 PRAMEF1O95521 474 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 ADSLP30566 484 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-214ENST00000522165 TSNQ15631 228 aaKnown RBP25.69■■□□□ 1.7
COL13A1-214ENST00000522165 KHDC1Q4VXA5 237 aaKnown RBP25.69■■□□□ 1.7
COL13A1-214ENST00000522165 C7orf61Q8IZ16 206 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 ENDOVQ8N8Q3 282 aaKnown RBP25.69■■□□□ 1.7
COL13A1-214ENST00000522165 CEP70Q8NHQ1 597 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 CLPTM1LQ96KA5 538 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 CATSPER2Q96P56 530 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 LYSMD1Q96S90 227 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 SPHK2Q9NRA0 654 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 MYO7AQ13402 2215 aa25.69■■□□□ 1.7
COL13A1-214ENST00000522165 CDC7O00311 574 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 PRMT5O14744 637 aaPredicted RBP25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SIX3O95343 332 aaPredicted RBP25.68■■□□□ 1.7
COL13A1-214ENST00000522165 PABPC1P11940 636 aaKnown RBP25.68■■□□□ 1.7
COL13A1-214ENST00000522165 GFAPP14136 432 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 TSPAN8P19075 237 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 CHRM3P20309 590 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 FUBP1Q96AE4 644 aaKnown RBP25.68■■□□□ 1.7
COL13A1-214ENST00000522165 TBC1D14Q9P2M4 693 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SCN8AQ9UQD0 1980 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SUPT3HB4E1H0 165 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SUPT3HO75486 399 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ECI2O75521 394 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 LMNAP02545 664 aaKnown RBP25.68■■□□□ 1.7
COL13A1-214ENST00000522165 TYRP14679 529 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 INHBCP55103 352 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 IL2P60568 153 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 C1QTNF8P60827 252 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ACSBG2Q5FVE4 666 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SNX20Q7Z614 316 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 SERPINA9Q86WD7 417 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ACTRT2Q8TDY3 377 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ECHDC3Q96DC8 303 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ZSWIM3Q96MP5 696 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 ASB2Q96Q27 587 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 RTKNQ9BST9 563 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 CEP44Q9C0F1 390 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 IL26Q9NPH9 171 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 APPL1Q9UKG1 709 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 PCDHB1Q9Y5F3 818 aa25.68■■□□□ 1.7
COL13A1-214ENST00000522165 A0A088AWK7 358 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 CCDC189A1A4V9 331 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 NPEPPSL1A6NEC2 478 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 SYCE1LA8MT33 242 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 E5RI56 91 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 THRAP10827 490 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 CDH13P55290 713 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 PCDH20Q8N6Y1 951 aaKnown RBP25.67■■□□□ 1.7
COL13A1-214ENST00000522165 EEF1AKMT1Q8WVE0 214 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 CPEB1Q9BZB8 566 aaKnown RBP25.67■■□□□ 1.7
COL13A1-214ENST00000522165 HCFC2Q9Y5Z7 792 aa25.67■■□□□ 1.7
COL13A1-214ENST00000522165 PDE4DIPQ5VU43 2346 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms