RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 AK4P27144 223 aaPredicted RBP27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 GEMP55040 296 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 SLC1A5Q15758 541 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 CERCAMQ5T4B2 595 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 ALS2CLQ60I27 953 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 PDPK2PQ6A1A2 396 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 SLC30A9Q6PML9 568 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 ZDHHC1Q8WTX9 485 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 HACD3Q9P035 362 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 PCDHB1Q9Y5F3 818 aa27.41■■□□□ 1.98
ATPAF1-201ENST00000329231 ATP1A1P05023 1023 aaKnown RBP27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 CCZ1BP86790 482 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 CCZ1P86791 482 aaPredicted RBP27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 LRP8Q14114 963 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 SPIDRQ14159 915 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 HLTFQ14527 1009 aaKnown RBP eCLIP27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ISXQ2M1V0 245 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ZNF569Q5MCW4 686 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ANKRD20A2Q5SQ80 823 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ANKRD20A1Q5TYW2 823 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ANKRD20A3Q5VUR7 823 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 TRAM1L1Q8N609 369 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 SYNDIG1Q9H7V2 258 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 RMI1Q9H9A7 625 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 ZNHIT2Q9UHR6 403 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 RABGEF1Q9UJ41 708 aa27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 OAS3Q9Y6K5 1087 aaKnown RBP27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 KMT2BQ9UMN6 2715 aaPredicted RBP27.4■■□□□ 1.98
ATPAF1-201ENST00000329231 AURKAO14965 403 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 KRT37O76014 449 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 FGF1P05230 155 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 PNLIPP16233 465 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 BPIP17213 487 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 HMGCLP35914 325 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 ACTR1BP42025 376 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 CHRNA4P43681 627 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 ACTR1AP61163 376 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 PRPSAP1Q14558 356 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 LRIT1Q9P2V4 623 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 APPL1Q9UKG1 709 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 AAR2Q9Y312 384 aaKnown RBP27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 ST14Q9Y5Y6 855 aa27.39■■□□□ 1.98
ATPAF1-201ENST00000329231 RP1P56715 2156 aa27.39■■□□□ 1.97
ATPAF1-201ENST00000329231 NTN3O00634 580 aaPredicted RBP27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 NUDT21O43809 227 aaKnown RBP27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 DNAJC6O75061 913 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 USP12O75317 370 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 SFTPA2Q8IWL1 248 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 SPATA13Q96N96 652 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 PPP1R2P1Q96PQ5 205 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 PLEKHG4BQ96PX9 1271 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 PLEKHM1Q9Y4G2 1056 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 RNF215Q9Y6U7 377 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 FREM2Q5SZK8 3169 aa27.38■■□□□ 1.97
ATPAF1-201ENST00000329231 SLC25A14O95258 325 aaPredicted RBP27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 CCDC175P0C221 793 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 KLF1Q13351 362 aaPredicted RBP27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 ZDHHC20Q5W0Z9 365 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 C17orf82Q86X59 251 aaPredicted RBP27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 BLOC1S5Q8TDH9 187 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 ANP32BQ92688 251 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 GFM1Q96RP9 751 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 CARD9Q9H257 536 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 LRRN3Q9H3W5 708 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 BPIFA1Q9NP55 256 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 RAXQ9Y2V3 346 aa27.37■■□□□ 1.97
ATPAF1-201ENST00000329231 RPLP0P05388 317 aaKnown RBP27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 PSMB4P28070 264 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 CCL7P80098 99 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 GLT6D1Q7Z4J2 308 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 CCNJLQ8IV13 435 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 TTC30BQ8N4P2 665 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 Q8N9G6 341 aaPredicted RBP27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 CCDC110Q8TBZ0 833 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 GLYATL1Q969I3 302 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 GORASP1Q9BQQ3 440 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 FICDQ9BVA6 458 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 TRIM39Q9HCM9 518 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 ENTPD2Q9Y5L3 495 aa27.36■■□□□ 1.97
ATPAF1-201ENST00000329231 WDFY3Q8IZQ1 3526 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 GPR89AB7ZAQ6 455 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 NUAK1O60285 661 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 BRINP1O60477 761 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 ECEL1O95672 775 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 AGTP01019 485 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 GPR89BP0CG08 455 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 MAZP56270 477 aaKnown RBP27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 BIRC2Q13490 618 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 SEL1L2Q5TEA6 688 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 PHYKPLQ8IUZ5 450 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 ATXN10Q9UBB4 475 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 PRKAB1Q9Y478 270 aa27.35■■□□□ 1.97
ATPAF1-201ENST00000329231 ARHGEF17Q96PE2 2063 aaPredicted RBP27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 APC2O95996 2303 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 ACACAQ13085 2346 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 C5orf60A6NFR6 353 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 RHPN2P1A8MT19 583 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 CASC3O15234 703 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 ZW10O43264 779 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms