RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CARS2Q9HA77 564 aaKnown RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 MAGEE1Q9HCI5 957 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 SIRPGQ9P1W8 387 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 SAE1Q9UBE0 346 aaPredicted RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 SUFUQ9UMX1 484 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 TFR2Q9UP52 801 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 PCDHB1Q9Y5F3 818 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 PKD1L2Q7Z442 2459 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 C1orf232A0A0U1RR37 186 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SOWAHDA6NJG2 315 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 NUDT21O43809 227 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 NOBOXO60393 691 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 BRINP1O60477 761 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ACTN2P35609 894 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ADCY8P40145 1251 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 POLD2P49005 469 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SPINT3P49223 89 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 COPS2P61201 443 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CDK18Q07002 472 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ADCY2Q08462 1091 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ILF3Q12906 894 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 PEX6Q13608 980 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 HLTFQ14527 1009 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 TCEA2Q15560 299 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 PPP2R5EQ16537 467 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 C14orf28Q4W4Y0 310 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 DAAM2Q86T65 1068 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 C17orf82Q86X59 251 aaPredicted RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CCL4L1Q8NHW4 92 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SNIP1Q8TAD8 396 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 KIAA1524Q8TCG1 905 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CCDC74AQ96AQ1 378 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 RBM41Q96IZ5 413 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ZNF578Q96N58 590 aaPredicted RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 WDR24Q96S15 920 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SRPK1Q96SB4 655 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 AGAP2Q99490 1192 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 VAT1Q99536 393 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 RIOK2Q9BVS4 552 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 GSDMCQ9BYG8 508 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CEP41Q9BYV8 373 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CDH19Q9H159 772 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 GOLPH3Q9H4A6 298 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 DPEP2Q9H4A9 486 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 GLOD4Q9HC38 313 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SPATS2LQ9NUQ6 558 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CD84Q9UIB8 345 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 RABGEF1Q9UJ41 708 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 CNOT6Q9ULM6 557 aaKnown RBP10.47□□□□□ -0.73
CCDC9-203ENST00000596938 EFR3BQ9Y2G0 817 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 PCDHA3Q9Y5H8 950 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 ENTPD2Q9Y5L3 495 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 DUSP10Q9Y6W6 482 aa10.47□□□□□ -0.73
CCDC9-203ENST00000596938 GOLGA6CA6NDK9 693 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 GOLGA6BA6NDN3 693 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 HACD1B0YJ81 288 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 TMX2-CTNND1H3BSU7 103 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PJA2O43164 708 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 TLX3O43711 291 aaPredicted RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 EPOP01588 193 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 MPOP05164 745 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 FGF1P05230 155 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 GOLGA6DP0CG33 693 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PTPN3P26045 913 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 GNPDA1P46926 289 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 ERVPABLB-1P60509 514 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 CCL7P80098 99 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 CTBSQ01459 385 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 WASHC5Q12768 1159 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 XRCC4Q13426 336 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 LRP8Q14114 963 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 SPIDRQ14159 915 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PYCR3Q53H96 274 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 CERCAMQ5T4B2 595 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 HENMT1Q5T8I9 393 aaKnown RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 KAZNQ674X7 775 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 C19orf48Q6RUI8 117 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 B4GALNT4Q76KP1 1039 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 KDELC2Q7Z4H8 507 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 SPATA22Q8NHS9 363 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 HNRNPLLQ8WVV9 542 aaKnown RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 KRT35Q92764 455 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 EID2BQ96D98 161 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 SLC46A1Q96NT5 459 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 LRRN3Q9H3W5 708 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms