RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 MAGEE1Q9HCI5 957 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 RAD18Q9NS91 495 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 PKD2L2Q9NZM6 624 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 SEPT10Q9P0V9 454 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 SLC17A4Q9Y2C5 497 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 PCDHA3Q9Y5H8 950 aa13.11□□□□□ -0.31
HNRNPC-205ENST00000553300 hCG_1818297A0A087WSY0 165 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 C1orf232A0A0U1RR37 186 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 HACD1B0YJ81 288 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 PJA2O43164 708 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 IVLP07476 585 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 PNLIPP16233 465 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CDC25BP30305 580 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CTNNA1P35221 906 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CETN2P41208 172 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CDK18Q07002 472 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■■□□ 15.2
HNRNPC-205ENST00000553300 PTPRRQ15256 657 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 QPCTQ16769 361 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 KAZNQ674X7 775 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 TADA1Q96BN2 335 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 SCARF2Q96GP6 870 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 HIC2Q96JB3 615 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 DPEP2Q9H4A9 486 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 GLOD4Q9HC38 313 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 SIRPGQ9P1W8 387 aa13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 ARHGEF17Q96PE2 2063 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-205ENST00000553300 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 ZW10O43264 779 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 CSO75390 466 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 APOC2P02655 101 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 GLB1P16278 677 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 PTPN3P26045 913 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 ACTN2P35609 894 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 LSSP48449 732 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 SPINT3P49223 89 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 VAV2P52735 878 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 XRCC4Q13426 336 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 SPIDRQ14159 915 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 PERM1Q5SV97 790 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 KCTD16Q68DU8 428 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 RAD9BQ6WBX8 426 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 BBS12Q6ZW61 710 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 KYQ8NBH2 561 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 TRIB3Q96RU7 358 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 RIOK2Q9BVS4 552 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 CD84Q9UIB8 345 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 RAXQ9Y2V3 346 aa13.09□□□□□ -0.31
HNRNPC-205ENST00000553300 A0A087WV48 116 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 RCCD1A6NED2 376 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 NUDT21O43809 227 aaKnown RBP13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 USP12O75317 370 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 NDST3O95803 873 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 SOD1P00441 154 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 EPOP01588 193 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 RWDD2BP57060 319 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 LRP8Q14114 963 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 C14orf28Q4W4Y0 310 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 CERCAMQ5T4B2 595 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 HENMT1Q5T8I9 393 aaKnown RBP13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 KIAA1328Q86T90 577 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 KRT35Q92764 455 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 FGF11Q92914 225 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 COX14Q96I36 57 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 SMIM14Q96QK8 99 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 VPS18Q9P253 973 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 FAM153AQ9UHL3 310 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 PCDHB1Q9Y5F3 818 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 DUSP10Q9Y6W6 482 aa13.08□□□□□ -0.31
HNRNPC-205ENST00000553300 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
HNRNPC-205ENST00000553300 A0A0U1RQS6 177 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms