RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KIAA0408Q6ZU52 694 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 GPR156Q8NFN8 814 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 OR10G6Q8NH81 332 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 SUV39H2Q9H5I1 410 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 UGT1A7Q9HAW7 530 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 UGT1A10Q9HAW8 530 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 UGT1A8Q9HAW9 530 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 STX18Q9P2W9 335 aaKnown RBP13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 ZNF839A8K0R7 811 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 PCCBP05166 539 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 HGFP14210 728 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 ITPKAP23677 461 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 CCND1P24385 295 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 TIE1P35590 1138 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 MED21Q13503 144 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 RFTN1Q14699 578 aaPredicted RBP13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 CARD16Q5EG05 197 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 PCDH20Q8N6Y1 951 aaKnown RBP13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 CD101Q93033 1021 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 EIF2B3Q9NR50 452 aaKnown RBP13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX6Q9UNH7 406 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 CNTN6Q9UQ52 1028 aa13.09□□□□□ -0.31
PTPRN2-202ENST00000389416 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 GFM2Q969S9 779 aaKnown RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 FERD3LQ96RJ6 166 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 ATG10Q9H0Y0 220 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CCDC162PA2VCL2 907 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 C2orf78A6NCI8 922 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 SLC7A4O43246 635 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 TNNI3P19429 210 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CENPLQ8N0S6 344 aaPredicted RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 OR2AP1Q8NGE2 309 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CDRT15Q96T59 188 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 AZIN1O14977 448 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 NTRK1P04629 796 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 CDH2P19022 906 aaPredicted RBP13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 KELP23276 732 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 NCALDP61601 193 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 GALNT2Q10471 571 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■■■■□ 24.5
PTPRN2-202ENST00000389416 PHKG1Q16816 387 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 PLEKHG4Q58EX7 1191 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 SLC25A23Q9BV35 468 aa13.08□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 H0Y858 1186 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 BIRC5O15392 142 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ATG13O75143 517 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 OTCP00480 354 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CA3P07451 260 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CRHR1P34998 444 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 GRM2Q14416 872 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 LRRC23Q53EV4 343 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CPNE9Q8IYJ1 553 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CFAP206Q8IYR0 622 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 BBS4Q96RK4 519 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 C1orf50Q9BV19 199 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 GGA2Q9UJY4 613 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 TK2O00142 265 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 LINC00032P0C843 101 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 BMPR1AP36894 532 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 PKNOX1P55347 436 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 POLE2P56282 527 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 USP46P62068 366 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 RPL38P63173 70 aaKnown RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ZDHHC20Q5W0Z9 365 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF599Q96NL3 588 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 PHACTR1Q9C0D0 580 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 COPG2Q9UBF2 871 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 PACSIN3Q9UKS6 424 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 GSAPA4D1B5 854 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF23P17027 643 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CCNHP51946 323 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF572Q7Z3I7 529 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 PHYKPLQ8IUZ5 450 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms