RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 C2orf27AQ580R0 203 aa17.08■□□□□ 0.33
COL4A2-201ENST00000360467 METTL3Q86U44 580 aaKnown RBP17.08■□□□□ 0.33
COL4A2-201ENST00000360467 HDDC3Q8N4P3 179 aa17.08■□□□□ 0.33
COL4A2-201ENST00000360467 ITCHQ96J02 903 aa17.08■□□□□ 0.33
COL4A2-201ENST00000360467 INTS7Q9NVH2 962 aaKnown RBP17.08■□□□□ 0.33
COL4A2-201ENST00000360467 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.33
COL4A2-201ENST00000360467 A0A1W2PPM1 405 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 SNPHO15079 494 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 FGF1P05230 155 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 NRLP54845 237 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 RFX4Q33E94 735 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 ADAMTSL2Q86TH1 951 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 DTNBP1Q96EV8 351 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 EBPLQ9BY08 206 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 EFR3BQ9Y2G0 817 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 CLDN11O75508 207 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 PTPN2P17706 415 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 SP2Q02086 613 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL4A2-201ENST00000360467 GALNT5Q7Z7M9 940 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 GPR180Q86V85 440 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 SPPL2BQ8TCT7 592 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 PCED1BQ96HM7 432 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
COL4A2-201ENST00000360467 MGRN1O60291 552 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 SIN3BO75182 1162 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 KELP23276 732 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 PGDP52209 483 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 CAPN13Q6MZZ7 669 aaPredicted RBP17.08■□□□□ 0.32
COL4A2-201ENST00000360467 PMF1Q6P1K2 205 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 TSSK3Q96PN8 268 aa17.08■□□□□ 0.32
COL4A2-201ENST00000360467 TTC24A2A3L6 582 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 CCNA2P20248 432 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 C4BPBP20851 252 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 PTPN9P43378 593 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ADRM1Q16186 407 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 LIPMQ5VYY2 423 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 HIC2Q96JB3 615 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 MFSD14AQ96MC6 490 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 EBNA1BP2Q99848 306 aaKnown RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 CXorf56Q9H5V9 222 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 OR5F1O95221 314 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 SLC6A2P23975 617 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 GNPDA1P46926 289 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 CAP1Q01518 475 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 KCT2Q8NC54 265 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 AENQ8WTP8 325 aaKnown RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 HMGB4Q8WW32 186 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 OSBPL2Q9H1P3 480 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 AZIN1O14977 448 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 TRBC1P01850 177 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 GIMD1P0DJR0 217 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 EFNA1P20827 205 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 LMO2P25791 158 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 STXBP1P61764 594 aaKnown RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 CRHR2Q13324 411 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 BRMS1LQ5PSV4 323 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 HECTD2Q5U5R9 776 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 LRRC39Q96DD0 335 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 SLC38A3Q99624 504 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 GLOD4Q9HC38 313 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ZNF304Q9HCX3 659 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 KCNK4Q9NYG8 393 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 IDSP22304 550 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 LRRC55Q6ZSA7 311 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 AP2M1Q96CW1 435 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ACE2Q9BYF1 805 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ABCB8Q9NUT2 735 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 TBC1D14Q9P2M4 693 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 COLEC10Q9Y6Z7 277 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 FAM25EA8MYX2 175 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 OR1F1O43749 312 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 LGR5O75473 907 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 MADCAM1Q13477 382 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ZACNQ401N2 412 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 PTPN20Q4JDL3 420 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 TMEM63BQ5T3F8 832 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 GK5Q6ZS86 529 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 ZBTB46Q86UZ6 589 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 RACGAP1Q9H0H5 632 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 NEK6Q9HC98 313 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 TIMM22Q9Y584 194 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 NCANO14594 1321 aa17.07■□□□□ 0.32
COL4A2-201ENST00000360467 KRR1Q13601 381 aaKnown RBP17.06■□□□□ 0.32
COL4A2-201ENST00000360467 PLEKHG4Q58EX7 1191 aa17.06■□□□□ 0.32
COL4A2-201ENST00000360467 VARS2Q5ST30 1063 aaKnown RBP17.06■□□□□ 0.32
COL4A2-201ENST00000360467 TATDN1Q6P1N9 297 aa17.06■□□□□ 0.32
COL4A2-201ENST00000360467 RCN3Q96D15 328 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms