RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX55-209ENST00000542286 MYOCOSA0A1B0GUC4 107 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 GOLGA8CPA6NN73 597 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 CAPN15O75808 1086 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 IPO13O94829 963 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 PCSK6P29122 969 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 PMLP29590 882 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 HADHAP40939 763 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 MYLK3Q32MK0 819 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 MSANTD2Q6P1R3 559 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ISCA2Q86U28 154 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 DENND1CQ8IV53 801 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 BHLHE22Q8NFJ8 381 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 FAM110BQ8TC76 370 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 RBM38Q9H0Z9 239 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 COPS7BQ9H9Q2 264 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 IL1RL2Q9HB29 575 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ADA2Q9NZK5 511 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ZFP37Q9Y6Q3 630 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 A0A1W2PQ45 241 aaPredicted RBP14.77□□□□□ -0.04
DDX55-209ENST00000542286 A0A1W2PQY0 241 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 AP3B1O00203 1094 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 TACR2P21452 398 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 NDST2P52849 883 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 RPL26P61254 145 aaKnown RBP14.77□□□□□ -0.04
DDX55-209ENST00000542286 ART3Q13508 389 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 FLOT2Q14254 428 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 GK3PQ14409 553 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 OR4D1Q15615 310 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 TRIP4Q15650 581 aaPredicted RBP14.77□□□□□ -0.04
DDX55-209ENST00000542286 FAM26DQ5JW98 314 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 PPP1R14BQ96C90 147 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 LRCH3Q96II8 777 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 NACA2Q9H009 215 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 STARD7Q9NQZ5 370 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 SMPD4Q9NXE4 827 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 MID2Q9UJV3 735 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 PCDHGC4Q9Y5F7 938 aa14.77□□□□□ -0.04
DDX55-209ENST00000542286 MROH6A6NGR9 719 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 SUPT3HO75486 399 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 PFKPQ01813 784 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 PLOD1Q02809 727 aaPredicted RBP14.77□□□□□ -0.05
DDX55-209ENST00000542286 ZNF423Q2M1K9 1284 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 AGKQ53H12 422 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 BNC2Q6ZN30 1099 aaPredicted RBP14.77□□□□□ -0.05
DDX55-209ENST00000542286 KBTBD6Q86V97 674 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 MARVELD2Q8N4S9 558 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 KLHL32Q96NJ5 620 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 GSTO2Q9H4Y5 243 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 DTNAQ9Y4J8 743 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 FNDC1Q4ZHG4 1894 aaPredicted RBP14.77□□□□□ -0.05
DDX55-209ENST00000542286 CASP8AP2Q9UKL3 1982 aa14.77□□□□□ -0.05
DDX55-209ENST00000542286 A0A087X1B8 175 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 WASH4PA8MWX3 477 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 ENPP3O14638 875 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 H2AFYO75367 372 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 COL6A2P12110 1019 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 PFKFB4Q16877 469 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 AGAP9Q5VTM2 703 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 METTL21CQ5VZV1 264 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 FUT10Q6P4F1 479 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 PAOXQ6QHF9 649 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 RNF168Q8IYW5 571 aaPredicted RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 LILRA2Q8N149 483 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 ZBTB8BQ8NAP8 495 aaPredicted RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 DIS3LQ8TF46 1054 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 JADE3Q92613 823 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 UBXN10Q96LJ8 280 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 PRKD2Q9BZL6 878 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 ARNT2Q9HBZ2 717 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 POLR3BQ9NW08 1133 aaPredicted RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 BTRCQ9Y297 605 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 IGLV3-10A0A075B6K4 115 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 CD3EAPO15446 510 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 PEX1O43933 1283 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 EOMESO95936 686 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 SLC2A3P11169 496 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 FMO4P31512 558 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 TM4SF4P48230 202 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 PRKAA2P54646 552 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 MTA1Q13330 715 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 GEN1Q17RS7 908 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 SCIMPQ6UWF3 145 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 CYP2R1Q6VVX0 501 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 RMDN1Q96DB5 314 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 CCDC97Q96F63 343 aaPredicted RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 FUBP3Q96I24 572 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDX55-209ENST00000542286 CASD1Q96PB1 797 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 SLC30A3Q99726 388 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 MRM3Q9HC36 420 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 DMTF1Q9Y222 760 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 FRMPD3Q5JV73 1810 aa14.76□□□□□ -0.05
DDX55-209ENST00000542286 RANBP2P49792 3224 aaKnown RBP14.76□□□□□ -0.05
DDX55-209ENST00000542286 E7ENX8 843 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 FBP2O00757 339 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms