RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LRRC8CQ8TDW0 803 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 RHBDF1Q96CC6 855 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 RNF125Q96EQ8 232 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 PGLYRP2Q96PD5 576 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 UHRF2Q96PU4 802 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 KLHL1Q9NR64 748 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 MCM9Q9NXL9 1143 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 SARDHQ9UL12 918 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 PADI1Q9ULC6 663 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 C16orf97H3BN30 126 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 TAF4O00268 1085 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 TNFSF14O43557 240 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC22A3O75751 556 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 IRF1P10914 325 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CETPP11597 493 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 MCM3P25205 808 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 ABCD3P28288 659 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CCT5P48643 541 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 PPM1FP49593 454 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 ISL1P61371 349 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 VAMP2P63027 116 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 FGFBP1Q14512 234 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CCDC96Q2M329 555 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 GPATCH4Q5T3I0 446 aaKnown RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 IRAK1BP1Q5VVH5 260 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 FAM122CQ6P4D5 195 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 KCTD18Q6PI47 426 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC46A3Q7Z3Q1 461 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CCDC13Q8IYE1 715 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CADM4Q8NFZ8 388 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 NOC3LQ8WTT2 800 aaKnown RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 PPM1EQ8WY54 764 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 USP13Q92995 863 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 GRAMD2BQ96HH9 432 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 HES6Q96HZ4 224 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC41A2Q96JW4 573 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 FAM110AQ9BQ89 295 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 H2AFJQ9BTM1 129 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 SEBOXQ9HB31 216 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 PCDH9Q9HC56 1237 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 PCDHB16Q9NRJ7 776 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC6A13Q9NSD5 602 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 ABCF3Q9NUQ8 709 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 TMEM30AQ9NV96 361 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 KCND2Q9NZV8 630 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 MPP6Q9NZW5 540 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 TAAR2Q9P1P5 351 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 PADI3Q9ULW8 664 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 OR2W1Q9Y3N9 320 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 CEPT1Q9Y6K0 416 aa3.34□□□□□ -1.87
HMGB1P29-201ENST00000505659 VCYO14598 125 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 TSPAN4O14817 238 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 F9P00740 461 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ATP1A1P05023 1023 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 CFC1BP0CG36 223 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 CFC1P0CG37 223 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 RBM39Q14498 530 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 SYT16Q17RD7 645 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 DUS1LQ6P1R4 473 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 RAD9BQ6WBX8 426 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 PQLC2Q6ZP29 291 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZNF354CQ86Y25 554 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ESX1Q8N693 406 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 PCDH20Q8N6Y1 951 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 KCNH5Q8NCM2 988 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ST8SIA4Q92187 359 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ALG14Q96F25 216 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 PPP1R13BQ96KQ4 1090 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 MTERF1Q99551 399 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 C1QTNF5Q9BXJ0 243 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 USP44Q9H0E7 712 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 PLEKHA5Q9HAU0 1116 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 VEZTQ9HBM0 779 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 FBRSL1Q9HCM7 1045 aaKnown RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 MKLN1Q9UL63 735 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 TTC7AQ9ULT0 858 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ERVK-11Q9UQG0 969 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 CAMK2AQ9UQM7 478 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 AMDHD2Q9Y303 409 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 CAPN7Q9Y6W3 813 aa3.33□□□□□ -1.88
HMGB1P29-201ENST00000505659 ASPDHA6ND91 283 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 AKR1B15C9JRZ8 316 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 CAPN9O14815 690 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PAK4O96013 591 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 EGFP01133 1207 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 IL7RP16871 459 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 ABCD1P33897 745 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PAFAH1B1P43034 410 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 GLIPR1P48060 266 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 FMO5P49326 533 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 HARS2P49590 506 aaKnown RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PHEXP78562 749 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 NEXNQ0ZGT2 675 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PTP4A2Q12974 167 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 DMP1Q13316 513 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 BAK1Q16611 211 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms