RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 BIRC2Q13490 618 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 NFIL3Q16649 462 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
MUC1-221ENST00000610359 DENND1BQ6P3S1 775 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 WDR74Q6RFH5 385 aaPredicted RBP6.86□□□□□ -1.31
MUC1-221ENST00000610359 SHC4Q6S5L8 630 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 TMEM110Q86TL2 294 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 RHOT1Q8IXI2 618 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 NETO2Q8NC67 525 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 THAP4Q8WY91 577 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 ARHGEF2Q92974 986 aaKnown RBP6.86□□□□□ -1.31
MUC1-221ENST00000610359 KAT5Q92993 513 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 STAMBPL1Q96FJ0 436 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 TMX3Q96JJ7 454 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 TRIM62Q9BVG3 475 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 GSDMCQ9BYG8 508 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 THAP9Q9H5L6 903 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 PCDH12Q9NPG4 1184 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 LHX9Q9NQ69 397 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 PIGVQ9NUD9 493 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 ARHGEF38Q9NXL2 777 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 KLHL3Q9UH77 587 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 OSGIN2Q9Y236 505 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 COQ4Q9Y3A0 265 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
MUC1-221ENST00000610359 NUP210LQ5VU65 1888 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 MN1Q10571 1320 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 PCM1Q15154 2024 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 A6NL46 340 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 E2F3O00716 465 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 ZNF185O15231 689 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 INSIG1O15503 277 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 POLR2DO15514 142 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 BUB1BO60566 1050 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 GRAP2O75791 330 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 NDUFA10O95299 355 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 EML2O95834 649 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 CEACAM5P06731 702 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 BPIP17213 487 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 KELP23276 732 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 MMP12P39900 470 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 GARSP41250 739 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 ACADSBP45954 432 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 FASLGP48023 281 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 NDST2P52849 883 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 PER3P56645 1201 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 YWHAEP62258 255 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 SNRPD1P62314 119 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 SH3BP2P78314 561 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 GNA12Q03113 381 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 FOXM1Q08050 763 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 ELP6Q0PNE2 266 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 ILF3Q12906 894 aaKnown RBP eCLIP6.85□□□□□ -1.31
MUC1-221ENST00000610359 ART3Q13508 389 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 RAPGEF1Q13905 1077 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 STILQ15468 1287 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 TSR1Q2NL82 804 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 SMTNL2Q2TAL5 461 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 FAM199XQ6PEV8 388 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 CDH24Q86UP0 819 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 HPS6Q86YV9 775 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 OR10G6Q8NH81 332 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 ADAMTS17Q8TE56 1095 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 UBE2Q2Q8WVN8 375 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 NCSTNQ92542 709 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 HMCESQ96FZ2 354 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 AHCYL2Q96HN2 611 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 ELMO2Q96JJ3 720 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 SMAD5Q99717 465 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 ZMYND15Q9H091 742 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 BRD8Q9H0E9 1235 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 TKTL2Q9H0I9 626 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 NDFIP2Q9NV92 336 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 PADI1Q9ULC6 663 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 SUFUQ9UMX1 484 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 SMC3Q9UQE7 1217 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 PCDHB4Q9Y5E5 795 aa6.85□□□□□ -1.31
MUC1-221ENST00000610359 KLF2Q9Y5W3 355 aaPredicted RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 COPG1Q9Y678 874 aaKnown RBP6.85□□□□□ -1.31
MUC1-221ENST00000610359 FN1P02751 2386 aaKnown RBP6.84□□□□□ -1.31
MUC1-221ENST00000610359 TSPAN11A1L157 253 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 C21orf140B9A014 251 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
MUC1-221ENST00000610359 F5H423 210 aaPredicted RBP6.84□□□□□ -1.31
MUC1-221ENST00000610359 TEX33O43247 280 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 SPAG6O75602 509 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 FAM155BO75949 473 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 RECQL5O94762 991 aaPredicted RBP6.84□□□□□ -1.31
MUC1-221ENST00000610359 TIAF1O95411 115 aa6.84□□□□□ -1.31
MUC1-221ENST00000610359 PIGNO95427 931 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms