RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SERPINA11Q86U17 422 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 RPAP2Q8IXW5 612 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZDHHC23Q8IYP9 409 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 OTUD6BQ8N6M0 293 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 OR4N2Q8NGD1 307 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 DDB2Q92466 427 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 EME1Q96AY2 570 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZBTB9Q96C00 473 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 RSRC1Q96IZ7 334 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 PPP1R13BQ96KQ4 1090 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 BRF2Q9HAW0 419 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 PCDHB16Q9NRJ7 776 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF644Q9H582 1327 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CPSF1Q10570 1443 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CD109Q6YHK3 1445 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ABCC6O95255 1503 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZFYVE16Q7Z3T8 1539 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 XRN1Q8IZH2 1706 aaKnown RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 FMN2Q9NZ56 1722 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 VPS37CA5D8V6 355 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CBY3A6NI87 242 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 KCNU1A8MYU2 1149 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCNDBP1O95273 360 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 HEXAP06865 529 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SPARCP09486 303 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC2A4P14672 509 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 PTPN2P17706 415 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 BDNFP23560 247 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CD38P28907 300 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 RGS2P41220 211 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 GPR12P47775 334 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CENPAP49450 140 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CLNS1AP54105 237 aaKnown RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 RWDD2BP57060 319 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCZ1BP86790 482 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCZ1P86791 482 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC18A2Q05940 514 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 EIF4A2Q14240 407 aaKnown RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SMN1Q16637 294 aaKnown RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SMTNL2Q2TAL5 461 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC45A4Q5BKX6 768 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SNX30Q5VWJ9 437 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ATG9BQ674R7 924 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ITPRIPL1Q6GPH6 555 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CDC73Q6P1J9 531 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 PXKQ7Z7A4 578 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 GPAT4Q86UL3 456 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ANKRD13BQ86YJ7 626 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CNTROBQ8N137 903 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ADSSL1Q8N142 457 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 CNNM3Q8NE01 707 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 N4BP2L2Q92802 583 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 HEMGNQ9BXL5 484 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 VIPAS39Q9H9C1 493 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 BATF3Q9NR55 127 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 PLEKHB1Q9UF11 243 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 TNNQ9UQP3 1299 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 SCINQ9Y6U3 715 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 PIAS3Q9Y6X2 628 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 RPGRIP1LQ68CZ1 1315 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ADGRF5Q8IZF2 1346 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 TTC21AQ8NDW8 1320 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 MSH6P52701 1360 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 RIMS2Q9UQ26 1411 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARAP3Q8WWN8 1544 aa4.6□□□□□ -1.67
HMGB1P16-201ENST00000447155 A0A096LPK6 155 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 DDTLA6NHG4 134 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MASP2O00187 686 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 TAF4O00268 1085 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 TGFB1I1O43294 461 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 NEBLO76041 1014 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 TOP3BO95985 862 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 CELA2AP08217 269 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MYZAPP0CAP1 466 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PRR35P0CG20 571 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 IRF1P10914 325 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ACADMP11310 421 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 LAMP2P13473 410 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF8P17098 575 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 HOXD9P28356 352 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PTGER1P34995 402 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARL3P36405 182 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MRPL12P52815 198 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC8A3P57103 927 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARF3P61204 181 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARF1P84077 181 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 SRSF4Q08170 494 aaKnown RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 DDR1Q08345 913 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 FOXD4Q12950 439 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 TRAF1Q13077 416 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 DRP2Q13474 957 aa4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 PDE1CQ14123 709 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P16-201ENST00000447155 MED1Q15648 1581 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms