RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 POLG2Q9UHN1 485 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 BLOC1S6Q9UL45 172 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 ARL5AQ9Y689 179 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 AP4B1Q9Y6B7 739 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 SMIM35A0A1B0GVV1 85 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 GLTPD2A6NH11 291 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 H3BN98 237 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 J3KR12 359 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 AZIN1O14977 448 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 UGT1A6P19224 532 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 UGT1A1P22309 533 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 UGT1A4P22310 534 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 UGT1A3P35503 534 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 UGT1A5P35504 534 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 YAP1P46937 504 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 HSPA7P48741 367 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 TUFMP49411 452 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 NEK3P51956 506 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 ZNF280AP59817 542 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 TSNQ15631 228 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 CRTC3Q6UUV7 619 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 PIWIL4Q7Z3Z4 852 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 SYT12Q8IV01 421 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 SOCS4Q8WXH5 440 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 MCRS1Q96EZ8 462 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 EBF2Q9HAK2 575 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 ZNF212Q9UDV6 495 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 ATRNL1Q5VV63 1379 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 FOCADQ5VW36 1801 aa9.12□□□□□ -0.95
SMARCA1-202ENST00000371122 A0A0U1RQS6 177 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 H0Y858 1186 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ULK1O75385 1050 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 RASSF9O75901 435 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CABYRO75952 493 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 IL1BP01584 269 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CKMT2P17540 419 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CORO1AP31146 461 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 POLD2P49005 469 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CENPAP49450 140 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 KCNQ1P51787 676 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ECT2LQ008S8 904 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 MAPKAPK3Q16644 382 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 LDLRAP1Q5SW96 308 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CPNE9Q8IYJ1 553 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ARL14EPQ8N8R7 260 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ING5Q8WYH8 240 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 LPGAT1Q92604 370 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 DPF3Q92784 378 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 SLC7A5P2Q9GIP4 190 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 KPNA5O15131 536 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ATG7O95352 703 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 DLGAP3O95886 979 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CHRM5P08912 532 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CDH2P19022 906 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CRHR1P34998 444 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 GATMP50440 423 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 SPIDRQ14159 915 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CARTPTQ16568 116 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 HIST2H2ACQ16777 129 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 TRIM16LQ309B1 348 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 PERM1Q5SV97 790 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ACBD5Q5T8D3 534 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 HIST2H2AA3Q6FI13 130 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 RBM44Q6ZP01 1051 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CLDN19Q8N6F1 224 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CASP10Q92851 521 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 PPP1R2P1Q96PQ5 205 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 MRPL57Q9BQC6 102 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 POLR1BQ9H9Y6 1135 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 VTI1BQ9UEU0 232 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 POLR3HQ9Y535 204 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 SF3B1O75533 1304 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 SCN9AQ15858 1988 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 LAMB1P07942 1786 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CACNA1CQ13936 2221 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ZBTB14O43829 449 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 AP2A1O95782 977 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ECHS1P30084 290 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 CRATP43155 626 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ELAVL2Q12926 359 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 FAM98BQ52LJ0 330 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ARHGAP15Q53QZ3 475 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 SPRYD7Q5W111 196 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 TYW3Q6IPR3 259 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 IRGCQ6NXR0 463 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 GALNT5Q7Z7M9 940 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 ZDHHC13Q8IUH4 622 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 PLD6Q8N2A8 252 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 MCOLN3Q8TDD5 553 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms