RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 ADAM28Q9UKQ2 775 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 PDE10AQ9Y233 779 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 A0A0G2JMP0 313 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 TTC24A2A3L6 582 aaPredicted RBP12.83□□□□□ -0.36
HERC3-203ENST00000407637 TRPC5OSA6NMA1 111 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 C16orf96A6NNT2 1141 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 B8ZZF3 427 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 MEN1O00255 615 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SSX4O60224 188 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 PTTG1O95997 202 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 MT-CO1P00395 513 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 FCGR1AP12314 374 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 ITGB5P18084 799 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 AGXTP21549 392 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 TGM2P21980 687 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 IL4RP24394 825 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 HOXD10P28358 340 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 CAPRIN1Q14444 709 aaKnown RBP12.83□□□□□ -0.36
HERC3-203ENST00000407637 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 FAM214AQ32MH5 1076 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 BRMS1LQ5PSV4 323 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 NEK10Q6ZWH5 1172 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 TAS1R3Q7RTX0 852 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
HERC3-203ENST00000407637 TRIM63Q969Q1 353 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 C12orf10Q9HB07 376 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 PCDHB3Q9Y5E6 796 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 A0A0X1KG70 313 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 CENPXA8MT69 81 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PDZK1P1A8MUH7 402 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 LDLRP01130 860 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 CHRNA1P02708 482 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PCMT1P22061 227 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 FMO4P31512 558 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 GBE1Q04446 702 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 TMEM151AQ8N4L1 468 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 SMG8Q8ND04 991 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 IL17RDQ8NFM7 739 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 HDAC2Q92769 488 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 PROX1Q92786 737 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 FCRL3Q96P31 734 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PNMA8BQ9ULN7 279 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 ADAMTSL1Q8N6G6 1762 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 SNX2O60749 519 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 CD19P15391 556 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 NCK1P16333 377 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 BNIP2Q12982 314 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 SUZ12Q15022 739 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 CTU2Q2VPK5 515 aaKnown RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 SEZ6Q53EL9 994 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 C8orf59Q8N0T1 100 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 DTX3Q8N9I9 347 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 TP53I13Q8NBR0 393 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 LEMD2Q8NC56 503 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PSD4Q8NDX1 1056 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 CHDHQ8NE62 594 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 NXNL1Q96CM4 212 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 SLC30A3Q99726 388 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 KCNH7Q9NS40 1196 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 PAK1IP1Q9NWT1 392 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 ACTR3BQ9P1U1 418 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 DSEQ9UL01 958 aa12.82□□□□□ -0.36
HERC3-203ENST00000407637 MAGED1Q9Y5V3 778 aaPredicted RBP12.82□□□□□ -0.36
HERC3-203ENST00000407637 POLR1CO15160 346 aaPredicted RBP12.81□□□□□ -0.36
HERC3-203ENST00000407637 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
HERC3-203ENST00000407637 CABYRO75952 493 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 TSPAN9O75954 239 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 NDST3O95803 873 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 HNRNPLP14866 589 aaKnown RBP eCLIP12.81□□□□□ -0.36
HERC3-203ENST00000407637 M6PRP20645 277 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 RRM2P31350 389 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 ETV3P41162 512 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 HTR2BP41595 481 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 C1QTNF8P60827 252 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 ENPEPQ07075 957 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 FCHO2Q0JRZ9 810 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 DUSP7Q16829 419 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 SCYL2Q6P3W7 929 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 CNSTQ6PJW8 725 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 HACD2Q6Y1H2 254 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 SVOPQ8N4V2 548 aa12.81□□□□□ -0.36
HERC3-203ENST00000407637 SEPHS2Q99611 448 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms