RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NUSAP1Q9BXS6 441 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 POLR3FQ9H1D9 316 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PPM1HQ9ULR3 514 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SAMM50Q9Y512 469 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 TRPV2Q9Y5S1 764 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 MFSD2BA6NFX1 497 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 ZBTB42B2RXF5 422 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 J3QW42 95 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SMAD9O15198 467 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GLRA2P23416 452 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 EEF1DP29692 281 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 YWHAZP63104 245 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 TNFRSF17Q02223 184 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CNTN2Q02246 1040 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PLA1AQ53H76 456 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FAM111BQ6SJ93 734 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 RASAL3Q86YV0 1011 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 RASGEF1CQ8N431 466 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 POU5F2Q8N7G0 328 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FAM71BQ8TC56 605 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SLC13A3Q8WWT9 602 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PTPRN2Q92932 1015 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FBXO32Q969P5 355 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 TWNKQ96RR1 684 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GORASP1Q9BQQ3 440 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 KIFC3Q9BVG8 833 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 TMEM117Q9H0C3 514 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SENP1Q9P0U3 644 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SUCLA2Q9P2R7 463 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SPASTQ9UBP0 616 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 DNAJC12Q9UKB3 198 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PADI4Q9UM07 663 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SMG5Q9UPR3 1016 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 KCNMB2Q9Y691 235 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 A0A087X0T9 212 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SLC16A4O15374 487 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 FAM189A1O60320 539 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CLEC2LP0C7M8 214 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 FAM228BP0C875 321 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 AGXTP21549 392 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CHRNA3P32297 505 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 NUP62P37198 522 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 ARSDP51689 593 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 RPS3AP61247 264 aaKnown RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 FMO1Q01740 532 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 PPP3CAQ08209 521 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 GRB14Q14449 540 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 RPS6KA2Q15349 733 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SNRNP35Q16560 246 aaKnown RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CLVS2Q5SYC1 327 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 FAM69AQ5T7M9 428 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 PLA2G4FQ68DD2 849 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 MRPL10Q7Z7H8 261 aaKnown RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SLC15A4Q8N697 577 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 HIPK4Q8NE63 616 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 LPCAT1Q8NF37 534 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 ADCY4Q8NFM4 1077 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 PHOSPHO2Q8TCD6 241 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SCFD2Q8WU76 684 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 PBKQ96KB5 322 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CBWD1Q9BRT8 395 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TBCDQ9BTW9 1192 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SLC5A7Q9GZV3 580 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TASP1Q9H6P5 420 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TXNRD2Q9NNW7 524 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CNIH4Q9P003 139 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SEPT9Q9UHD8 586 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 AJAP1Q9UKB5 411 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 GMEB1Q9Y692 573 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TRBV23OR9-2A0A075B6M9 112 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 MANSC4A6NHS7 340 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 ANKRD63C9JTQ0 380 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 HBP1O60381 514 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 PPM1BO75688 479 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 KRT37O76014 449 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 ACAA1P09110 424 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 STAG3L3P0CL85 134 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 CHN1P15882 459 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 SELPP16109 830 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 NKX3-2P78367 333 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 GUCY1A3Q02108 690 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 FSTL1Q12841 308 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 GPS1Q13098 491 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 DRAP1Q14919 205 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 AANATQ16613 207 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 KCNT1Q5JUK3 1230 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 GLRA4Q5JXX5 417 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 ATG16L1Q676U5 607 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 TWF2Q6IBS0 349 aaKnown RBP7.86□□□□□ -1.15
BRCC3-208ENST00000453705 C11orf63Q6NUN7 778 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 RGMBQ6NW40 437 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 HDXQ7Z353 690 aa7.86□□□□□ -1.15
BRCC3-208ENST00000453705 COMTD1Q86VU5 262 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms