RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SYNDIG1LA6NDD5 238 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 SH2D7A6NKC9 451 aaPredicted RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 TTC36A6NLP5 189 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 TTC34A8MYJ7 566 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 CCER2I3L3R5 266 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 AP3D1O14617 1153 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 PPM1DO15297 605 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 PMPCBO75439 489 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 RB1P06400 928 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 ELANEP08246 267 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 CREB1P16220 341 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 DDX6P26196 483 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 COPB2P35606 906 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 BSGP35613 385 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 TDGQ13569 410 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 DNASE1L3Q13609 305 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 WTAPQ15007 396 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 PSMD6Q15008 389 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 FAM187BQ17R55 369 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 LRRC24Q50LG9 513 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 RABL3Q5HYI8 236 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 ZNF648Q5T619 568 aaPredicted RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 FAM69AQ5T7M9 428 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 STPG1Q5TH74 334 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 CES5AQ6NT32 575 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 SYNE3Q6ZMZ3 975 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 RRM2BQ7LG56 351 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 GALNT5Q7Z7M9 940 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 ADGRG6Q86SQ4 1221 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 METTL25Q8N6Q8 603 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 LSMEM1Q8N8F7 131 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 ENDOVQ8N8Q3 282 aaKnown RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 LSM14AQ8ND56 463 aaKnown RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 RP9Q8TA86 221 aaKnown RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 NPIPB3Q92617 1050 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 FKBP10Q96AY3 582 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 FEM1CQ96JP0 617 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 IFIH1Q9BYX4 1025 aaKnown RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 AKIP1Q9NQ31 210 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 DDX4Q9NQI0 724 aaKnown RBP5□□□□□ -1.61
HMGB1P23-201ENST00000518743 EHD3Q9NZN3 535 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 KLK13Q9UKR3 277 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 FBXO4Q9UKT5 387 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 SLC12A4Q9UP95 1085 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 TMEM5Q9Y2B1 443 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 NEUROG3Q9Y4Z2 214 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 PCDHA10Q9Y5I2 948 aa5□□□□□ -1.61
HMGB1P23-201ENST00000518743 CYP3A7-CYP3A51PA0A087WV96 503 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 C16orf96A6NNT2 1141 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PATE3B3GLJ2 98 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PROM1O43490 865 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 FOXS1O43638 330 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 URI1O94763 535 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 HEXIM1O94992 359 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 SNAI1O95863 264 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 UBL4AP11441 157 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 ACO1P21399 889 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 GATA3P23771 443 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CYP3A7P24462 503 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 DUSP1P28562 367 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CNR2P34972 360 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 HOXD13P35453 343 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 LIMK1P53667 647 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 OAZ1P54368 228 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CDH15P55291 814 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 EIF3BP55884 814 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 BLOC1S1P78537 153 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CCDC15Q0P6D6 951 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTP4A2Q12974 167 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 BMPR2Q13873 1038 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 SF3A2Q15428 464 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 TCTN1Q2MV58 587 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PRICKLE4Q2TBC4 344 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 GLE1Q53GS7 698 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 COLEC12Q5KU26 742 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 TSSK4Q6SA08 328 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 Q6ZRM9 215 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTCHD4Q6ZW05 846 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 WDR53Q7Z5U6 358 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 MAML2Q8IZL2 1156 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 LINS1Q8NG48 757 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 AFAP1L1Q8TED9 768 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 NCSTNQ92542 709 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 TBC1D5Q92609 795 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CCDC34Q96HJ3 373 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 NECTIN4Q96NY8 510 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 GHITMQ9H3K2 345 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 MUC13Q9H3R2 512 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 POMKQ9H5K3 350 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 KLC4Q9NSK0 619 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 ANKEF1Q9NU02 776 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 HOXC10Q9NYD6 342 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 KCND2Q9NZV8 630 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 MPP6Q9NZW5 540 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 MGAT4CQ9UBM8 478 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 SLC25A10Q9UBX3 287 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 CDH22Q9UJ99 828 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 RAB21Q9UL25 225 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 NOL7Q9UMY1 257 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms