RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C6orf52Q5T4I8 152 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF410Q86VK4 478 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 RTKNQ9BST9 563 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 TRIM64CA6NLI5 447 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MAXP61244 160 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 BCL2L1Q07817 233 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PRKG2Q13237 762 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 KBTBD8Q8NFY9 601 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 GRPEL2Q8TAA5 225 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 CIB1Q99828 191 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MARCH7Q9H992 704 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 CDH22Q9UJ99 828 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MKL2Q9ULH7 1088 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 TNFSF13BQ9Y275 285 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 IFRD1O00458 451 aaPredicted RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PIK3CGP48736 1102 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 EPHB3P54753 998 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 BNIP2Q12982 314 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ITGA7Q13683 1181 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PTPRNQ16849 979 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ARMC12Q5T9G4 340 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 HTRA1Q92743 480 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ACO2Q99798 780 aaKnown RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PRDM16Q9HAZ2 1276 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ABCC13Q9NSE7 274 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MARCH2Q9P0N8 246 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 URODP06132 367 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 DGKAP23743 735 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 PSMA3P25788 255 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 TPTEP56180 551 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 C6orf183Q5T699 404 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 MZT2BQ6NZ67 158 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 GK5Q6ZS86 529 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 ULK1O75385 1050 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 CABYRO75952 493 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 CREB1P16220 341 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 NUP62P37198 522 aaPredicted RBP16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 HPCAL1P37235 193 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 ADCYAP1R1P41586 468 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 TUBA1BP68363 451 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 TUBA1AQ71U36 451 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 GATAD2AQ86YP4 633 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 P2RY11Q96G91 374 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 BPIFA1Q9NP55 256 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 LGALS13Q9UHV8 139 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 AZIN1O14977 448 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 LGALS2P05162 132 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 SKIV2LQ15477 1246 aaKnown RBP16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 RAP1GAP2Q684P5 730 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 ABCG8Q9H221 673 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 YDJCA8MPS7 323 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 FGF10O15520 208 aaPredicted RBP16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 B4GALT5O43286 388 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 C2P06681 752 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 TYSND1Q2T9J0 566 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 TIGD2Q4W5G0 525 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 FNBP1LQ5T0N5 605 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 ANKRD52Q8NB46 1076 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 BBS4Q96RK4 519 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 CDC42P60953 191 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 SPIRE1Q08AE8 756 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 RALGDSQ12967 914 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 PLCL1Q15111 1095 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 PTPN20Q4JDL3 420 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 PAGE2BQ5JRK9 111 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 VWA5B1Q5TIE3 1220 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 CDC73Q6P1J9 531 aa16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 MRPL48Q96GC5 212 aaKnown RBP16.54■□□□□ 0.24
SH3RF1-201ENST00000284637 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 BTN3A3O00478 584 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 RGL2O15211 777 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 MLYCDO95822 493 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 GJB1P08034 283 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CERCAMQ5T4B2 595 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ZCCHC8Q6NZY4 707 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 RDH11Q8TC12 318 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 LENG9Q96B70 501 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CCDC59Q9P031 241 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 AP3M1Q9Y2T2 418 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ANXA5P08758 320 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 MMP8P22894 467 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ABL2P42684 1182 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 MFSD10Q14728 455 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 EEF1DP3Q658K8 133 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 KLHDC10Q6PID8 442 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 VPS35Q96QK1 796 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms