RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W URN1Q06525 465 aaKnown RBP6.97□□□□□ -1.29
PSH1YOL054W YDL144CQ07589 356 aa6.97□□□□□ -1.29
PSH1YOL054W NOC3Q07896 663 aaPredicted RBP6.97□□□□□ -1.29
PSH1YOL054W ARG82P07250 355 aa6.96□□□□□ -1.3
PSH1YOL054W MCM2P29469 868 aa6.96□□□□□ -1.3
PSH1YOL054W MLF3P32047 452 aa6.96□□□□□ -1.3
PSH1YOL054W KTR2P33550 425 aa6.96□□□□□ -1.3
PSH1YOL054W YBR287WP38355 427 aa6.96□□□□□ -1.3
PSH1YOL054W RAD55P38953 406 aa6.96□□□□□ -1.3
PSH1YOL054W MAD1P40957 749 aa6.96□□□□□ -1.3
PSH1YOL054W RMD1Q03441 430 aa6.96□□□□□ -1.3
PSH1YOL054W TAF8Q03750 510 aa6.96□□□□□ -1.3
PSH1YOL054W SPR28Q04921 423 aa6.96□□□□□ -1.3
PSH1YOL054W BSC2Q05611 235 aa6.96□□□□□ -1.3
PSH1YOL054W YLR346CQ06139 101 aa6.96□□□□□ -1.3
PSH1YOL054W YEF3P16521 1044 aaKnown RBP6.95□□□□□ -1.3
PSH1YOL054W TRK2P28584 889 aa6.95□□□□□ -1.3
PSH1YOL054W AHP1P38013 176 aaKnown RBP6.95□□□□□ -1.3
PSH1YOL054W OPY1P38271 328 aa6.95□□□□□ -1.3
PSH1YOL054W OCA5P38738 679 aa6.95□□□□□ -1.3
PSH1YOL054W QDR2P40474 542 aa6.95□□□□□ -1.3
PSH1YOL054W CLN2P20438 545 aa6.94□□□□□ -1.3
PSH1YOL054W TYS1P36421 394 aaKnown RBP6.94□□□□□ -1.3
PSH1YOL054W YIR014WP40570 242 aa6.94□□□□□ -1.3
PSH1YOL054W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
PSH1YOL054W ESF1Q06344 628 aaKnown RBP6.94□□□□□ -1.3
PSH1YOL054W SRF1Q12516 437 aa6.94□□□□□ -1.3
PSH1YOL054W HAP1P0CE41 1502 aa6.94□□□□□ -1.3
PSH1YOL054W RAD9P14737 1309 aa6.94□□□□□ -1.3
PSH1YOL054W SUI2P20459 304 aaKnown RBP6.93□□□□□ -1.3
PSH1YOL054W GLY1P37303 387 aaKnown RBP6.93□□□□□ -1.3
PSH1YOL054W RPS26AP39938 119 aaKnown RBP6.93□□□□□ -1.3
PSH1YOL054W RPS26BP39939 119 aaKnown RBP6.93□□□□□ -1.3
PSH1YOL054W AAD14P42884 376 aa6.93□□□□□ -1.3
PSH1YOL054W JJJ2P46997 583 aa6.93□□□□□ -1.3
PSH1YOL054W MSN5P52918 1224 aa6.93□□□□□ -1.3
PSH1YOL054W YNL165WP53891 406 aa6.93□□□□□ -1.3
PSH1YOL054W IRS4P36115 615 aaKnown RBP6.92□□□□□ -1.3
PSH1YOL054W SSN3P39073 555 aa6.92□□□□□ -1.3
PSH1YOL054W NTA1P40354 457 aa6.92□□□□□ -1.3
PSH1YOL054W NUP85P46673 744 aa6.92□□□□□ -1.3
PSH1YOL054W RSC4Q02206 625 aa6.92□□□□□ -1.3
PSH1YOL054W YIR007WP40566 764 aa6.91□□□□□ -1.3
PSH1YOL054W MTO1P53070 669 aa6.91□□□□□ -1.3
PSH1YOL054W YGR122WP53272 402 aa6.91□□□□□ -1.3
PSH1YOL054W MAK10Q02197 733 aa6.91□□□□□ -1.3
PSH1YOL054W MAG2Q06436 670 aaKnown RBP6.91□□□□□ -1.3
PSH1YOL054W CLC1P17891 233 aa6.9□□□□□ -1.3
PSH1YOL054W MSN1P22148 382 aa6.9□□□□□ -1.3
PSH1YOL054W KAP122P32767 1081 aa6.9□□□□□ -1.3
PSH1YOL054W ISW1P38144 1129 aa6.9□□□□□ -1.3
PSH1YOL054W YGR035CP53222 116 aa6.9□□□□□ -1.3
PSH1YOL054W YML133CQ03099 1374 aa6.9□□□□□ -1.31
PSH1YOL054W YLL067CQ07888 1374 aa6.9□□□□□ -1.31
PSH1YOL054W YLL066CQ99208 1374 aa6.9□□□□□ -1.31
PSH1YOL054W PET112P33893 541 aa6.89□□□□□ -1.31
PSH1YOL054W YHL008CP38750 627 aa6.89□□□□□ -1.31
PSH1YOL054W PSY2P40164 858 aa6.89□□□□□ -1.31
PSH1YOL054W MPP10P47083 593 aaKnown RBP6.89□□□□□ -1.31
PSH1YOL054W ALD6P54115 500 aaKnown RBP6.89□□□□□ -1.31
PSH1YOL054W FPR4Q06205 392 aaPredicted RBP6.89□□□□□ -1.31
PSH1YOL054W INP54Q08227 384 aaKnown RBP6.89□□□□□ -1.31
PSH1YOL054W TIF6Q12522 245 aaKnown RBP6.89□□□□□ -1.31
PSH1YOL054W IRE1P32361 1115 aa6.88□□□□□ -1.31
PSH1YOL054W GIP1P38229 639 aa6.88□□□□□ -1.31
PSH1YOL054W VAC8P39968 578 aa6.88□□□□□ -1.31
PSH1YOL054W RGD2P43556 714 aa6.88□□□□□ -1.31
PSH1YOL054W YFR016CP43597 1233 aaKnown RBP6.88□□□□□ -1.31
PSH1YOL054W SCW11P53189 542 aa6.88□□□□□ -1.31
PSH1YOL054W EAF7P53911 425 aaKnown RBP6.88□□□□□ -1.31
PSH1YOL054W VPS16Q03308 798 aa6.88□□□□□ -1.31
PSH1YOL054W HPF1Q05164 967 aa6.88□□□□□ -1.31
PSH1YOL054W PIN2Q12057 282 aa6.88□□□□□ -1.31
PSH1YOL054W TY1A-BLQ12266 440 aa6.88□□□□□ -1.31
PSH1YOL054W KRE5P22023 1365 aa6.87□□□□□ -1.31
PSH1YOL054W RAD2P07276 1031 aa6.87□□□□□ -1.31
PSH1YOL054W CYC8P14922 966 aa6.87□□□□□ -1.31
PSH1YOL054W MNR2P35724 969 aa6.87□□□□□ -1.31
PSH1YOL054W SHM1P37292 490 aaPredicted RBP6.87□□□□□ -1.31
PSH1YOL054W ECM2P38241 364 aaKnown RBP6.87□□□□□ -1.31
PSH1YOL054W RTR1P40084 226 aaPredicted RBP6.87□□□□□ -1.31
PSH1YOL054W RRP46P53256 223 aaPredicted RBP6.87□□□□□ -1.31
PSH1YOL054W DAL4Q04895 635 aa6.87□□□□□ -1.31
PSH1YOL054W KAR2P16474 682 aaKnown RBP6.86□□□□□ -1.31
PSH1YOL054W DLD1P32891 587 aa6.86□□□□□ -1.31
PSH1YOL054W BSD2P38356 321 aa6.86□□□□□ -1.31
PSH1YOL054W BUD27P43573 796 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
PSH1YOL054W CWC24P53769 259 aa6.86□□□□□ -1.31
PSH1YOL054W TAP42Q04372 366 aa6.86□□□□□ -1.31
PSH1YOL054W YOR296WQ08748 1289 aa6.86□□□□□ -1.31
PSH1YOL054W PSK1P31374 1356 aa6.85□□□□□ -1.31
PSH1YOL054W RPS31P05759 152 aaKnown RBP6.85□□□□□ -1.31
PSH1YOL054W AIM46P38885 310 aa6.85□□□□□ -1.31
PSH1YOL054W MRPS18P42847 217 aa6.85□□□□□ -1.31
PSH1YOL054W SAP155P43612 1002 aa6.85□□□□□ -1.31
PSH1YOL054W ALD3P54114 506 aa6.85□□□□□ -1.31
PSH1YOL054W YCS4Q06156 1176 aa6.85□□□□□ -1.31
PSH1YOL054W WRS1Q12109 432 aaKnown RBP6.85□□□□□ -1.31
PSH1YOL054W YOL098CQ12496 1037 aa6.85□□□□□ -1.31
PSH1YOL054W YRF1-4O13559 1382 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms