RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	RIM11	P38615	370 aa		4.06	□□□□□ -1.76
LYS9	YNR050C	LSO1	Q3E827	93 aa		4.06	□□□□□ -1.76
LYS9	YNR050C	HTS1	P07263	546 aa	Known RBP	4.05	□□□□□ -1.76
LYS9	YNR050C	RIM8	P53179	542 aa		4.05	□□□□□ -1.76
LYS9	YNR050C	PNP1	Q05788	311 aa		4.05	□□□□□ -1.76
LYS9	YNR050C	PRP5	P21372	849 aa	Predicted RBP	4.04	□□□□□ -1.76
LYS9	YNR050C	PRO1	P32264	428 aa		4.04	□□□□□ -1.76
LYS9	YNR050C	DUR3	P33413	735 aa		4.04	□□□□□ -1.76
LYS9	YNR050C	MRPL22	P53881	309 aa		4.04	□□□□□ -1.76
LYS9	YNR050C	MEC3	Q02574	474 aa		4.04	□□□□□ -1.76
LYS9	YNR050C	CMR1	Q12510	522 aa	Known RBP	4.04	□□□□□ -1.76
LYS9	YNR050C	NPR1	P22211	790 aa		4.03	□□□□□ -1.76
LYS9	YNR050C	RRN6	P32786	894 aa		4.03	□□□□□ -1.76
LYS9	YNR050C	YML083C	Q04526	418 aa		4.03	□□□□□ -1.76
LYS9	YNR050C	ALG6	Q12001	544 aa	Known RBP	4.03	□□□□□ -1.76
LYS9	YNR050C	TAD3	Q9URQ3	322 aa		4.03	□□□□□ -1.76
LYS9	YNR050C	INO80	P53115	1489 aa		4.03	□□□□□ -1.76
LYS9	YNR050C	GSF2	Q04697	403 aa	Known RBP	4.02	□□□□□ -1.77
LYS9	YNR050C	SOD2	P00447	233 aa		4.01	□□□□□ -1.77
LYS9	YNR050C	PTC7	P38797	343 aa		4.01	□□□□□ -1.77
LYS9	YNR050C	NFS1	P25374	497 aa		4	□□□□□ -1.77
LYS9	YNR050C	TOD6	P34219	525 aa		4	□□□□□ -1.77
LYS9	YNR050C	ABZ1	P37254	787 aa	Predicted RBP	4	□□□□□ -1.77
LYS9	YNR050C	REI1	P38344	393 aa	Predicted RBP	4	□□□□□ -1.77
LYS9	YNR050C	YPL277C	Q08989	487 aa		4	□□□□□ -1.77
LYS9	YNR050C	SMY2	P32909	740 aa	Known RBP	3.99	□□□□□ -1.77
LYS9	YNR050C	YGR045C	P53229	120 aa		3.99	□□□□□ -1.77
LYS9	YNR050C	UTP22	P53254	1237 aa	Predicted RBP	3.99	□□□□□ -1.77
LYS9	YNR050C	ETP1	P38748	585 aa	Known RBP	3.98	□□□□□ -1.77
LYS9	YNR050C	GTS1	P40956	396 aa		3.98	□□□□□ -1.77
LYS9	YNR050C	CLU1	Q03690	1277 aa	Known RBP	3.98	□□□□□ -1.77
LYS9	YNR050C	LEO1	P38439	464 aa		3.97	□□□□□ -1.77
LYS9	YNR050C	ELA1	P53861	379 aa	Predicted RBP	3.97	□□□□□ -1.77
LYS9	YNR050C	NOB1	Q08444	459 aa	Known RBP	3.97	□□□□□ -1.77
LYS9	YNR050C	CTS1	P29029	562 aa		3.96	□□□□□ -1.77
LYS9	YNR050C	BOL3	P39724	118 aa		3.96	□□□□□ -1.77
LYS9	YNR050C	RSC4	Q02206	625 aa		3.96	□□□□□ -1.77
LYS9	YNR050C	RPS13	P05756	151 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	YPT53	P36019	220 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	SHM2	P37291	469 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	SAP155	P43612	1002 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-DR6	P0CX70	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-ER1	P0CX71	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-LR2	P0CX72	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-PL	P0CX73	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-JR1	P0CX74	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-LR3	P0CX75	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-ML2	P0CX76	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	NNK1	P36003	928 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	PUS7	Q08647	676 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-GR1	Q12085	440 aa		3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	TY1A-OL	Q92392	440 aa	Known RBP	3.95	□□□□□ -1.78
LYS9	YNR050C	SAM35	P14693	329 aa		3.94	□□□□□ -1.78
LYS9	YNR050C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
LYS9	YNR050C	ARL1	P38116	183 aa	Known RBP	3.94	□□□□□ -1.78
LYS9	YNR050C	TUB2	P02557	457 aa	Known RBP	3.93	□□□□□ -1.78
LYS9	YNR050C	FUR4	P05316	633 aa	Known RBP	3.92	□□□□□ -1.78
LYS9	YNR050C	YDR132C	Q03900	495 aa		3.92	□□□□□ -1.78
LYS9	YNR050C	PNS1	Q12412	539 aa		3.92	□□□□□ -1.78
LYS9	YNR050C	YLR358C	O13565	187 aa		3.91	□□□□□ -1.78
LYS9	YNR050C	SNO2	P53823	222 aa		3.91	□□□□□ -1.78
LYS9	YNR050C	TPP1	Q03796	238 aa		3.91	□□□□□ -1.78
LYS9	YNR050C	AVO1	Q08236	1176 aa		3.91	□□□□□ -1.78
LYS9	YNR050C	YAF9	P53930	226 aa		3.9	□□□□□ -1.79
LYS9	YNR050C	FLP1	P03870	423 aa		3.89	□□□□□ -1.79
LYS9	YNR050C	ECM2	P38241	364 aa	Known RBP	3.89	□□□□□ -1.79
LYS9	YNR050C	SLS1	P42900	643 aa		3.89	□□□□□ -1.79
LYS9	YNR050C	EXO5	P38289	585 aa		3.88	□□□□□ -1.79
LYS9	YNR050C	NEM1	P38757	446 aa		3.88	□□□□□ -1.79
LYS9	YNR050C	NUT1	P53114	1132 aa		3.88	□□□□□ -1.79
LYS9	YNR050C	SLI1	P53304	468 aa		3.88	□□□□□ -1.79
LYS9	YNR050C	UFD2	P54860	961 aa		3.88	□□□□□ -1.79
LYS9	YNR050C	MON2	P48563	1636 aa	Predicted RBP	3.87	□□□□□ -1.79
LYS9	YNR050C	YHL012W	P38709	493 aa		3.87	□□□□□ -1.79
LYS9	YNR050C	NMD3	P38861	518 aa	Known RBP	3.87	□□□□□ -1.79
LYS9	YNR050C	TAT2	P38967	592 aa		3.87	□□□□□ -1.79
LYS9	YNR050C	YLR257W	Q06146	321 aa	Known RBP	3.87	□□□□□ -1.79
LYS9	YNR050C	PMT7	Q06644	662 aa		3.87	□□□□□ -1.79
LYS9	YNR050C	MNL2	Q12205	849 aa		3.87	□□□□□ -1.79
LYS9	YNR050C	SSA4	P22202	642 aa	Known RBP	3.86	□□□□□ -1.79
LYS9	YNR050C	MDL2	P33311	773 aa		3.86	□□□□□ -1.79
LYS9	YNR050C	FOL2	P51601	243 aa	Known RBP	3.86	□□□□□ -1.79
LYS9	YNR050C	PUS9	Q12069	462 aa		3.86	□□□□□ -1.79
LYS9	YNR050C	RET1	P22276	1149 aa	Known RBP	3.85	□□□□□ -1.79
LYS9	YNR050C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
LYS9	YNR050C	YAR028W	P39548	234 aa		3.84	□□□□□ -1.79
LYS9	YNR050C	YNL011C	P53980	444 aa		3.84	□□□□□ -1.79
LYS9	YNR050C	SRO9	P25567	434 aa	Known RBP	3.83	□□□□□ -1.8
LYS9	YNR050C	MCM5	P29496	775 aa	Known RBP	3.83	□□□□□ -1.8
LYS9	YNR050C	MEF2	P39677	819 aa		3.83	□□□□□ -1.8
LYS9	YNR050C	QDR1	P40475	563 aa		3.83	□□□□□ -1.8
LYS9	YNR050C	GCN5	Q03330	439 aa		3.83	□□□□□ -1.8
LYS9	YNR050C	BSC2	Q05611	235 aa		3.83	□□□□□ -1.8
LYS9	YNR050C	AIM26	P32858	118 aa		3.82	□□□□□ -1.8
LYS9	YNR050C	YKL077W	P36081	392 aa		3.82	□□□□□ -1.8
LYS9	YNR050C	GLO3	P38682	493 aa	Known RBP	3.82	□□□□□ -1.8
LYS9	YNR050C	SPT20	P50875	604 aa		3.82	□□□□□ -1.8
LYS9	YNR050C	DMA2	P53924	522 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms