RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	FAR11	P53917	953 aa		5.77	□□□□□ -1.49
RCM1	YNL022C	TIF6	Q12522	245 aa	Known RBP	5.77	□□□□□ -1.49
RCM1	YNL022C	SRB8	P25648	1427 aa		5.76	□□□□□ -1.49
RCM1	YNL022C	PEP7	P32609	515 aa		5.76	□□□□□ -1.49
RCM1	YNL022C	RRP14	P36080	434 aa	Known RBP	5.76	□□□□□ -1.49
RCM1	YNL022C	NCL1	P38205	684 aa	Known RBP	5.76	□□□□□ -1.49
RCM1	YNL022C	OSH7	P38755	437 aa		5.76	□□□□□ -1.49
RCM1	YNL022C	AIM46	P38885	310 aa		5.76	□□□□□ -1.49
RCM1	YNL022C	DAK2	P43550	591 aa		5.76	□□□□□ -1.49
RCM1	YNL022C	CLN2	P20438	545 aa		5.75	□□□□□ -1.49
RCM1	YNL022C	YKL091C	P33324	310 aa	Known RBP	5.75	□□□□□ -1.49
RCM1	YNL022C	FYV10	P40492	516 aa		5.75	□□□□□ -1.49
RCM1	YNL022C	YRB30	P53107	440 aa	Predicted RBP	5.75	□□□□□ -1.49
RCM1	YNL022C	ALD6	P54115	500 aa	Known RBP	5.75	□□□□□ -1.49
RCM1	YNL022C	RMD1	Q03441	430 aa		5.75	□□□□□ -1.49
RCM1	YNL022C	WRS1	Q12109	432 aa	Known RBP	5.75	□□□□□ -1.49
RCM1	YNL022C	TY1A-BL	Q12266	440 aa		5.75	□□□□□ -1.49
RCM1	YNL022C	TOP1	P04786	769 aa		5.74	□□□□□ -1.49
RCM1	YNL022C	YSP2	Q06681	1438 aa		5.74	□□□□□ -1.49
RCM1	YNL022C	IQG1	Q12280	1495 aa		5.74	□□□□□ -1.49
RCM1	YNL022C	LTE1	P07866	1435 aa		5.73	□□□□□ -1.49
RCM1	YNL022C	MCM2	P29469	868 aa		5.73	□□□□□ -1.49
RCM1	YNL022C	MRPL16	P38064	232 aa		5.73	□□□□□ -1.49
RCM1	YNL022C	YHL008C	P38750	627 aa		5.73	□□□□□ -1.49
RCM1	YNL022C	ALD3	P54114	506 aa		5.73	□□□□□ -1.49
RCM1	YNL022C	LCB5	Q06147	687 aa	Known RBP	5.73	□□□□□ -1.49
RCM1	YNL022C	SEC7	P11075	2009 aa	Known RBP	5.73	□□□□□ -1.49
RCM1	YNL022C	ECM2	P38241	364 aa	Known RBP	5.72	□□□□□ -1.49
RCM1	YNL022C	YIL165C	P40446	119 aa		5.72	□□□□□ -1.49
RCM1	YNL022C	YGR122W	P53272	402 aa		5.72	□□□□□ -1.49
RCM1	YNL022C	HEH2	Q03281	663 aa		5.72	□□□□□ -1.49
RCM1	YNL022C	RSC2	Q06488	889 aa		5.72	□□□□□ -1.49
RCM1	YNL022C	FPR3	P38911	411 aa	Known RBP	5.71	□□□□□ -1.49
RCM1	YNL022C	YER156C	P40093	338 aa	Known RBP	5.71	□□□□□ -1.49
RCM1	YNL022C	ITC1	P53125	1264 aa		5.71	□□□□□ -1.49
RCM1	YNL022C	CWC24	P53769	259 aa		5.71	□□□□□ -1.49
RCM1	YNL022C	YDR444W	Q04093	687 aa		5.71	□□□□□ -1.49
RCM1	YNL022C	SPR28	Q04921	423 aa		5.71	□□□□□ -1.49
RCM1	YNL022C	EMG1	Q06287	252 aa	Known RBP	5.71	□□□□□ -1.49
RCM1	YNL022C	ESF1	Q06344	628 aa	Known RBP	5.71	□□□□□ -1.49
RCM1	YNL022C	INP54	Q08227	384 aa	Known RBP	5.71	□□□□□ -1.49
RCM1	YNL022C	DIT1	P21623	536 aa		5.71	□□□□□ -1.5
RCM1	YNL022C	YCS4	Q06156	1176 aa		5.71	□□□□□ -1.5
RCM1	YNL022C	GCN2	P15442	1659 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	FLP1	P03870	423 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	KAR2	P16474	682 aa	Known RBP	5.7	□□□□□ -1.5
RCM1	YNL022C	ROG3	P43602	733 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	VPS16	Q03308	798 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	MSH6	Q03834	1242 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	PIN2	Q12057	282 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	YOR131C	Q12486	218 aa		5.7	□□□□□ -1.5
RCM1	YNL022C	DOP1	Q03921	1698 aa		5.69	□□□□□ -1.5
RCM1	YNL022C	YJL049W	P47048	450 aa		5.69	□□□□□ -1.5
RCM1	YNL022C	YDR461C-A	Q2V2P7	80 aa		5.69	□□□□□ -1.5
RCM1	YNL022C	BNI1	P41832	1953 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	FPS1	P23900	669 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	MET22	P32179	357 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
RCM1	YNL022C	PET112	P33893	541 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	RPS26A	P39938	119 aa	Known RBP	5.68	□□□□□ -1.5
RCM1	YNL022C	RPS26B	P39939	119 aa	Known RBP	5.68	□□□□□ -1.5
RCM1	YNL022C	RTS3	P53289	263 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	YMR265C	Q03508	461 aa	Known RBP	5.68	□□□□□ -1.5
RCM1	YNL022C	TY1A-MR1	Q04215	440 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	CDC53	Q12018	815 aa	Known RBP	5.68	□□□□□ -1.5
RCM1	YNL022C	CHC1	P22137	1653 aa	Known RBP	5.68	□□□□□ -1.5
RCM1	YNL022C	MMS1	Q06211	1407 aa		5.68	□□□□□ -1.5
RCM1	YNL022C	PPT1	P53043	513 aa		5.67	□□□□□ -1.5
RCM1	YNL022C	NAM8	Q00539	523 aa	Known RBP	5.67	□□□□□ -1.5
RCM1	YNL022C	BUD21	Q08492	214 aa	Predicted RBP	5.67	□□□□□ -1.5
RCM1	YNL022C	MCD1	Q12158	566 aa		5.67	□□□□□ -1.5
RCM1	YNL022C	DRS2	P39524	1355 aa		5.67	□□□□□ -1.5
RCM1	YNL022C	HXK1	P04806	485 aa	Known RBP	5.66	□□□□□ -1.5
RCM1	YNL022C	FUS1	P11710	512 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	CYC8	P14922	966 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	IDI1	P15496	288 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RCM1	YNL022C	PRP40	P33203	583 aa	Known RBP	5.66	□□□□□ -1.5
RCM1	YNL022C	IOC3	P43596	787 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	YJR008W	P47085	338 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	ALG12	P53730	551 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	CUZ1	P53899	274 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	NSE3	Q05541	303 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	PMT7	Q06644	662 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	BNR1	P40450	1375 aa		5.66	□□□□□ -1.5
RCM1	YNL022C	PYC2	P32327	1180 aa	Known RBP	5.65	□□□□□ -1.5
RCM1	YNL022C	KRE33	P53914	1056 aa	Known RBP	5.65	□□□□□ -1.5
RCM1	YNL022C	CTR9	P89105	1077 aa		5.65	□□□□□ -1.5
RCM1	YNL022C	DAL4	Q04895	635 aa		5.65	□□□□□ -1.5
RCM1	YNL022C	SSF2	Q12153	453 aa	Predicted RBP	5.65	□□□□□ -1.5
RCM1	YNL022C	RAD2	P07276	1031 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	CIT2	P08679	460 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	TSR4	P25040	408 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	MNR2	P35724	969 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	CEM1	P39525	442 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	RVS167	P39743	482 aa	Known RBP	5.64	□□□□□ -1.51
RCM1	YNL022C	LYS5	P50113	272 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	NUT1	P53114	1132 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	YNR040W	P53736	256 aa		5.64	□□□□□ -1.51
RCM1	YNL022C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 123.6 ms