RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	TAF1	P46677	1066 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	RCM1	P53972	490 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	RCF1	Q03713	159 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	YKU80	Q04437	629 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	MMR1	Q06324	491 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	SLX4	Q12098	748 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	DDP1	Q99321	188 aa	Known RBP	5.27	□□□□□ -1.57
CLF1	YLR117C	RAD5	P32849	1169 aa	Predicted RBP	5.27	□□□□□ -1.57
CLF1	YLR117C	SRL3	P36167	246 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	YAP3	P38749	330 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	SHC1	P39000	512 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	PEX14	P53112	341 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	YNL247W	P53852	767 aa	Known RBP	5.27	□□□□□ -1.57
CLF1	YLR117C	WAR1	Q03631	944 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	UTP4	Q06679	776 aa	Known RBP	5.27	□□□□□ -1.57
CLF1	YLR117C	MET7	Q08645	548 aa		5.27	□□□□□ -1.57
CLF1	YLR117C	PRT1	P06103	763 aa	Known RBP	5.26	□□□□□ -1.57
CLF1	YLR117C	PDR1	P12383	1068 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	ARG1	P22768	420 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	KCC4	P25389	1037 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	CSE1	P33307	960 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	YEL1	P34225	687 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	PIH1	P38768	344 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	LIN1	P38852	340 aa	Predicted RBP	5.26	□□□□□ -1.57
CLF1	YLR117C	MRX1	P40050	688 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	FYV10	P40492	516 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	YIL001W	P40560	513 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	YIR042C	P40586	236 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	TRS85	P46944	698 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	VTC3	Q02725	835 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	ATG26	Q06321	1198 aa		5.26	□□□□□ -1.57
CLF1	YLR117C	SUI3	P09064	285 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	NAT1	P12945	854 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	RME1	P32338	300 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	YEL043W	P32618	956 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	RRM3	P38766	723 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	CAJ1	P39101	391 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	NUP60	P39705	539 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	GCN20	P43535	752 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	YML119W	Q03208	357 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	RPO41	P13433	1351 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	VAS1	P07806	1104 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	GPA1	P08539	472 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	CDC16	P09798	840 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	TAL1	P15019	335 aa	Known RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	IME1	P21190	360 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	PTH2	P34222	208 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	TFG2	P41896	400 aa	Predicted RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	STR2	P47164	639 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	CAF130	P53280	1122 aa	Predicted RBP	5.25	□□□□□ -1.57
CLF1	YLR117C	DSL1	P53847	754 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	FMP30	Q02883	468 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	YLR177W	Q06251	628 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	YOR238W	Q08634	303 aa		5.25	□□□□□ -1.57
CLF1	YLR117C	ADE6	P38972	1358 aa	Known RBP	5.24	□□□□□ -1.57
CLF1	YLR117C	RAD1	P06777	1100 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	CPS1	P27614	576 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	CDC15	P27636	974 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	YNG2	P38806	282 aa	Known RBP	5.24	□□□□□ -1.57
CLF1	YLR117C	MIC19	P43594	170 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	SHE10	P53075	577 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	SPO1	P53541	631 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	TFB2	Q02939	513 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	RRP9	Q06506	573 aa	Known RBP	5.24	□□□□□ -1.57
CLF1	YLR117C	JIP3	O13555	125 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	TYR1	P20049	452 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	UBP1	P25037	809 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	RPN2	P32565	945 aa	Known RBP	5.24	□□□□□ -1.57
CLF1	YLR117C	VPS35	P34110	944 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	YER130C	P39959	443 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	VID27	P40157	782 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	MPC54	Q08550	464 aa		5.24	□□□□□ -1.57
CLF1	YLR117C	MST1	P07236	462 aa		5.23	□□□□□ -1.57
CLF1	YLR117C	GSY2	P27472	705 aa		5.23	□□□□□ -1.57
CLF1	YLR117C	RPC19	P28000	142 aa	Known RBP	5.23	□□□□□ -1.57
CLF1	YLR117C	SRP40	P32583	406 aa	Predicted RBP	5.23	□□□□□ -1.57
CLF1	YLR117C	PET112	P33893	541 aa		5.23	□□□□□ -1.57
CLF1	YLR117C	BTN2	P53286	410 aa		5.23	□□□□□ -1.57
CLF1	YLR117C	FAR1	P21268	830 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	NFU1	P32860	256 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	STO1	P34160	861 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	STB1	P42845	420 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	ARI1	P53111	347 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	VPS75	P53853	264 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	OSH2	Q12451	1283 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	YMR085W	P0CF18	432 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	KAR2	P16474	682 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	RRP43	P25359	394 aa	Predicted RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	RDS1	P25611	832 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	LOS1	P33418	1100 aa	Predicted RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	PTC4	P38089	393 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	ATG14	P38270	344 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	AMN1	P38285	549 aa	Predicted RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	OSH3	P38713	996 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	SYG1	P40528	902 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	GVP36	P40531	326 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	YPT11	P48559	417 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	RBL2	P48606	106 aa	Known RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	ADA2	Q02336	434 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	PLP1	Q04004	230 aa		5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms