RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSC2	YGR244C	ACE2	P21192	770 aa		11.34	□□□□□ -0.59
LSC2	YGR244C	PRO3	P32263	286 aa	Known RBP	11.34	□□□□□ -0.59
LSC2	YGR244C	CST26	P38226	397 aa		11.34	□□□□□ -0.59
LSC2	YGR244C	CSM2	P40465	213 aa		11.34	□□□□□ -0.59
LSC2	YGR244C	HAP5	Q02516	242 aa		11.34	□□□□□ -0.59
LSC2	YGR244C	YLR407W	Q06070	228 aa		11.34	□□□□□ -0.59
LSC2	YGR244C	PES4	P39684	611 aa		11.33	□□□□□ -0.6
LSC2	YGR244C	UTP7	P40055	554 aa	Known RBP	11.33	□□□□□ -0.6
LSC2	YGR244C	NIT1	P40447	199 aa		11.33	□□□□□ -0.6
LSC2	YGR244C	HYR1	P40581	163 aa	Known RBP	11.33	□□□□□ -0.6
LSC2	YGR244C	EMP47	P43555	445 aa		11.33	□□□□□ -0.6
LSC2	YGR244C	GDE1	Q02979	1223 aa		11.33	□□□□□ -0.6
LSC2	YGR244C	YOR111W	Q99210	232 aa		11.33	□□□□□ -0.6
LSC2	YGR244C	GAL2	P13181	574 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	CBP3	P21560	335 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	RNR3	P21672	869 aa	Known RBP	11.32	□□□□□ -0.6
LSC2	YGR244C	RAD53	P22216	821 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	RDS1	P25611	832 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	MAL33	P38157	468 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	FOL1	P53848	824 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	VPS30	Q02948	557 aa		11.32	□□□□□ -0.6
LSC2	YGR244C	MYO5	Q04439	1219 aa	Known RBP	11.32	□□□□□ -0.6
LSC2	YGR244C	ETT1	Q08421	412 aa	Known RBP	11.32	□□□□□ -0.6
LSC2	YGR244C	CIT1	P00890	479 aa		11.31	□□□□□ -0.6
LSC2	YGR244C	PGI1	P12709	554 aa	Known RBP	11.31	□□□□□ -0.6
LSC2	YGR244C	KIN1	P13185	1064 aa		11.31	□□□□□ -0.6
LSC2	YGR244C	SWI4	P25302	1093 aa	Known RBP	11.31	□□□□□ -0.6
LSC2	YGR244C	TPS3	P38426	1054 aa	Known RBP	11.31	□□□□□ -0.6
LSC2	YGR244C	YDR341C	Q05506	607 aa	Known RBP	11.31	□□□□□ -0.6
LSC2	YGR244C	NBL1	Q3E7Y6	73 aa		11.31	□□□□□ -0.6
LSC2	YGR244C	SPT21	P35209	758 aa		11.3	□□□□□ -0.6
LSC2	YGR244C	VPS45	P38932	577 aa		11.3	□□□□□ -0.6
LSC2	YGR244C	CCT5	P40413	562 aa	Known RBP	11.3	□□□□□ -0.6
LSC2	YGR244C	LAP2	Q10740	671 aa		11.3	□□□□□ -0.6
LSC2	YGR244C	APC11	Q12157	165 aa		11.3	□□□□□ -0.6
LSC2	YGR244C	CHS3	P29465	1165 aa		11.29	□□□□□ -0.6
LSC2	YGR244C	RXT2	P38255	430 aa		11.29	□□□□□ -0.6
LSC2	YGR244C	CIR1	P42940	261 aa		11.29	□□□□□ -0.6
LSC2	YGR244C	YLR278C	Q05854	1341 aa		11.29	□□□□□ -0.6
LSC2	YGR244C	MET6	P05694	767 aa	Known RBP	11.28	□□□□□ -0.6
LSC2	YGR244C	RGP1	P16664	663 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	SEC20	P28791	383 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	TOM71	P38825	639 aa	Known RBP	11.28	□□□□□ -0.6
LSC2	YGR244C	SKG3	Q06315	1026 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	CSC1	Q06538	782 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	CEX1	Q12453	761 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	AIM44	Q99299	758 aa		11.28	□□□□□ -0.6
LSC2	YGR244C	HXK1	P04806	485 aa	Known RBP	11.27	□□□□□ -0.61
LSC2	YGR244C	NUC1	P08466	329 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	ASF1	P32447	279 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	DID4	P36108	232 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	KEL1	P38853	1164 aa	Known RBP	11.27	□□□□□ -0.61
LSC2	YGR244C	RVS167	P39743	482 aa	Known RBP	11.27	□□□□□ -0.61
LSC2	YGR244C	TPM2	P40414	161 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	PCI8	P40512	444 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	FAR11	P53917	953 aa		11.27	□□□□□ -0.61
LSC2	YGR244C	UBP9	P39967	754 aa		11.26	□□□□□ -0.61
LSC2	YGR244C	LSB1	P53281	241 aa		11.26	□□□□□ -0.61
LSC2	YGR244C	NAF1	P53919	492 aa	Known RBP	11.26	□□□□□ -0.61
LSC2	YGR244C	MDM1	Q01846	1127 aa		11.26	□□□□□ -0.61
LSC2	YGR244C	GIS4	Q04233	774 aa		11.26	□□□□□ -0.61
LSC2	YGR244C	GSC2	P40989	1895 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	TUB2	P02557	457 aa	Known RBP	11.25	□□□□□ -0.61
LSC2	YGR244C	ERG12	P07277	443 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	CDC6	P09119	513 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	RPN12	P32496	274 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	ELM1	P32801	640 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	ACA1	P39970	489 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	CWC15	Q03772	175 aa	Known RBP	11.25	□□□□□ -0.61
LSC2	YGR244C	DSE3	Q08729	430 aa		11.25	□□□□□ -0.61
LSC2	YGR244C	GET3	Q12154	354 aa	Known RBP	11.25	□□□□□ -0.61
LSC2	YGR244C	FRS2	P15625	503 aa	Known RBP	11.24	□□□□□ -0.61
LSC2	YGR244C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
LSC2	YGR244C	SAM2	P19358	384 aa	Known RBP	11.24	□□□□□ -0.61
LSC2	YGR244C	PWP2	P25635	923 aa	Known RBP	11.24	□□□□□ -0.61
LSC2	YGR244C	SAS3	P34218	831 aa		11.24	□□□□□ -0.61
LSC2	YGR244C	PEA2	P40091	420 aa		11.24	□□□□□ -0.61
LSC2	YGR244C	SMD2	Q06217	110 aa	Known RBP	11.24	□□□□□ -0.61
LSC2	YGR244C	RPL8A	P17076	256 aa	Known RBP	11.23	□□□□□ -0.61
LSC2	YGR244C	VPS1	P21576	704 aa	Known RBP	11.23	□□□□□ -0.61
LSC2	YGR244C	VHR2	P40041	505 aa		11.23	□□□□□ -0.61
LSC2	YGR244C	DCS2	Q12123	353 aa		11.23	□□□□□ -0.61
LSC2	YGR244C	TIP41	Q12199	356 aa		11.23	□□□□□ -0.61
LSC2	YGR244C	MAK11	P20484	414 aa	Known RBP	11.22	□□□□□ -0.61
LSC2	YGR244C	MBR1	P23493	339 aa		11.22	□□□□□ -0.61
LSC2	YGR244C	RTC4	P53850	401 aa		11.22	□□□□□ -0.61
LSC2	YGR244C	CSM3	Q04659	317 aa		11.22	□□□□□ -0.61
LSC2	YGR244C	EIS1	Q05050	843 aa	Known RBP	11.22	□□□□□ -0.61
LSC2	YGR244C	PUS5	Q06244	254 aa		11.22	□□□□□ -0.61
LSC2	YGR244C	VIP1	Q06685	1146 aa	Known RBP	11.22	□□□□□ -0.61
LSC2	YGR244C	CSR2	Q12734	1121 aa		11.22	□□□□□ -0.61
LSC2	YGR244C	DDP1	Q99321	188 aa	Known RBP	11.22	□□□□□ -0.61
LSC2	YGR244C	TUS1	Q06412	1307 aa		11.21	□□□□□ -0.61
LSC2	YGR244C	SRP54	P20424	541 aa	Known RBP	11.21	□□□□□ -0.61
LSC2	YGR244C	CCT3	P39077	534 aa	Known RBP	11.21	□□□□□ -0.61
LSC2	YGR244C	RSC1	P53236	928 aa		11.21	□□□□□ -0.61
LSC2	YGR244C	SOL4	P53315	255 aa		11.21	□□□□□ -0.61
LSC2	YGR244C	BNI5	P53890	448 aa	Known RBP	11.21	□□□□□ -0.61
LSC2	YGR244C	SUB2	Q07478	446 aa	Known RBP	11.21	□□□□□ -0.61
LSC2	YGR244C	YOR296W	Q08748	1289 aa		11.21	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms