RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	YAF9	P53930	226 aa		4.43	□□□□□ -1.7
ECO1	YFR027W	YIG1	Q08956	461 aa		4.43	□□□□□ -1.7
ECO1	YFR027W	ELG1	Q12050	791 aa		4.43	□□□□□ -1.7
ECO1	YFR027W	MAE1	P36013	669 aa	Known RBP	4.42	□□□□□ -1.7
ECO1	YFR027W	RRP15	Q06511	250 aa	Predicted RBP	4.42	□□□□□ -1.7
ECO1	YFR027W	PRP40	P33203	583 aa	Known RBP	4.41	□□□□□ -1.7
ECO1	YFR027W	CTH1	P47976	325 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	GCV1	P48015	400 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	MON1	P53129	644 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	FAR11	P53917	953 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	MED7	Q08278	222 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	OXR1	Q08952	273 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	YLR122C	Q12312	125 aa		4.41	□□□□□ -1.7
ECO1	YFR027W	SSN2	P38931	1420 aa		4.4	□□□□□ -1.7
ECO1	YFR027W	KAR2	P16474	682 aa	Known RBP	4.4	□□□□□ -1.71
ECO1	YFR027W	ERS1	P17261	260 aa		4.4	□□□□□ -1.71
ECO1	YFR027W	RSC6	P25632	483 aa		4.4	□□□□□ -1.71
ECO1	YFR027W	MCM5	P29496	775 aa	Known RBP	4.4	□□□□□ -1.71
ECO1	YFR027W	RPT1	P33299	467 aa	Known RBP	4.4	□□□□□ -1.71
ECO1	YFR027W	RPS0B	P46654	252 aa	Known RBP	4.4	□□□□□ -1.71
ECO1	YFR027W	POL32	P47110	350 aa		4.4	□□□□□ -1.71
ECO1	YFR027W	TOS4	Q06266	489 aa		4.4	□□□□□ -1.71
ECO1	YFR027W	ATE1	P16639	503 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	ASF1	P32447	279 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	KAE1	P36132	386 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	ARL1	P38116	183 aa	Known RBP	4.39	□□□□□ -1.71
ECO1	YFR027W	YFR016C	P43597	1233 aa	Known RBP	4.39	□□□□□ -1.71
ECO1	YFR027W	TCB2	P48231	1178 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	UTP22	P53254	1237 aa	Predicted RBP	4.39	□□□□□ -1.71
ECO1	YFR027W	NCE103	P53615	221 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	MEC3	Q02574	474 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	NOG1	Q02892	647 aa	Known RBP	4.39	□□□□□ -1.71
ECO1	YFR027W	DAL4	Q04895	635 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	AOS1	Q06624	347 aa		4.39	□□□□□ -1.71
ECO1	YFR027W	TCB3	Q03640	1545 aa	Known RBP	4.39	□□□□□ -1.71
ECO1	YFR027W	HXK1	P04806	485 aa	Known RBP	4.38	□□□□□ -1.71
ECO1	YFR027W	COQ2	P32378	372 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	ELM1	P32801	640 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	EXO5	P38289	585 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	ENP1	P38333	483 aa	Known RBP	4.38	□□□□□ -1.71
ECO1	YFR027W	MGE1	P38523	228 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	SHU2	P38957	223 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	YJR107W	P47145	328 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	ULP1	Q02724	621 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	REC8	Q12188	680 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	YLL054C	Q12244	843 aa		4.38	□□□□□ -1.71
ECO1	YFR027W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-DR6	P0CX70	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-ER1	P0CX71	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-LR2	P0CX72	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-PL	P0CX73	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-JR1	P0CX74	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-LR3	P0CX75	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-ML2	P0CX76	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
ECO1	YFR027W	UGA4	P32837	571 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	LIP5	P32875	414 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TOS1	P38288	455 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	FAA3	P39002	694 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	KIP3	P53086	805 aa	Known RBP	4.37	□□□□□ -1.71
ECO1	YFR027W	YGR122W	P53272	402 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	YPL109C	Q02981	657 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	YOR223W	Q12015	292 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-GR1	Q12085	440 aa		4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.37	□□□□□ -1.71
ECO1	YFR027W	TY1A-OL	Q92392	440 aa	Known RBP	4.37	□□□□□ -1.71
ECO1	YFR027W	MNN4	P36044	1178 aa		4.36	□□□□□ -1.71
ECO1	YFR027W	ADI1	Q03677	179 aa		4.36	□□□□□ -1.71
ECO1	YFR027W	YKL077W	P36081	392 aa		4.35	□□□□□ -1.71
ECO1	YFR027W	SAF1	P38352	637 aa		4.35	□□□□□ -1.71
ECO1	YFR027W	YRB30	P53107	440 aa	Predicted RBP	4.35	□□□□□ -1.71
ECO1	YFR027W	YMR074C	Q04773	145 aa		4.35	□□□□□ -1.71
ECO1	YFR027W	BRE4	Q07660	1125 aa		4.35	□□□□□ -1.71
ECO1	YFR027W	SGS1	P35187	1447 aa		4.35	□□□□□ -1.71
ECO1	YFR027W	CYC8	P14922	966 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	MSH3	P25336	1018 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	SQT1	P35184	431 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	REI1	P38344	393 aa	Predicted RBP	4.34	□□□□□ -1.71
ECO1	YFR027W	NEM1	P38757	446 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	PEX28	P38848	579 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	DOT1	Q04089	582 aa	Known RBP	4.34	□□□□□ -1.71
ECO1	YFR027W	MCD1	Q12158	566 aa		4.34	□□□□□ -1.71
ECO1	YFR027W	RAD2	P07276	1031 aa		4.33	□□□□□ -1.72
ECO1	YFR027W	SEC23	P15303	768 aa	Known RBP	4.33	□□□□□ -1.72
ECO1	YFR027W	VMA4	P22203	233 aa	Known RBP	4.33	□□□□□ -1.72
ECO1	YFR027W	PRE9	P23638	258 aa	Known RBP	4.33	□□□□□ -1.72
ECO1	YFR027W	RDH54	P38086	958 aa		4.33	□□□□□ -1.72
ECO1	YFR027W	FYV10	P40492	516 aa		4.33	□□□□□ -1.72
ECO1	YFR027W	RSM26	P47141	266 aa		4.33	□□□□□ -1.72
ECO1	YFR027W	YGR130C	P53278	816 aa		4.33	□□□□□ -1.72
ECO1	YFR027W	MAG2	Q06436	670 aa	Known RBP	4.33	□□□□□ -1.72
ECO1	YFR027W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
ECO1	YFR027W	QCR6	P00127	147 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	TAF13	P11747	167 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	MCM2	P29469	868 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	AKR1	P39010	764 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	RPS26A	P39938	119 aa	Known RBP	4.32	□□□□□ -1.72
ECO1	YFR027W	RPS26B	P39939	119 aa	Known RBP	4.32	□□□□□ -1.72
ECO1	YFR027W	PIC2	P40035	300 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	MRPS18	P42847	217 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms